RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 KCNQ3O43525 872 aa19.25■□□□□ 0.67
LRCH3-202ENST00000414675 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
LRCH3-202ENST00000414675 CCT4P50991 539 aaKnown RBP19.24■□□□□ 0.67
LRCH3-202ENST00000414675 ERBB3P21860 1342 aa19.24■□□□□ 0.67
LRCH3-202ENST00000414675 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 FKBP5Q13451 457 aaPredicted RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 RPAP2Q8IXW5 612 aaPredicted RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 DEKP35659 375 aaKnown RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 AMOTQ4VCS5 1084 aa19.23■□□□□ 0.67
LRCH3-202ENST00000414675 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
LRCH3-202ENST00000414675 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
LRCH3-202ENST00000414675 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
LRCH3-202ENST00000414675 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
LRCH3-202ENST00000414675 CADPS2Q86UW7 1296 aa19.22■□□□□ 0.67
LRCH3-202ENST00000414675 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
LRCH3-202ENST00000414675 COL18A1P39060 1754 aa19.22■□□□□ 0.67
LRCH3-202ENST00000414675 RNMTO43148 476 aaKnown RBP19.22■□□□□ 0.67
LRCH3-202ENST00000414675 N4BP2Q86UW6 1770 aaPredicted RBP19.21■□□□□ 0.67
LRCH3-202ENST00000414675 TEFQ10587 303 aa19.21■□□□□ 0.67
LRCH3-202ENST00000414675 PHAXQ9H814 394 aaKnown RBP19.21■□□□□ 0.67
LRCH3-202ENST00000414675 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
LRCH3-202ENST00000414675 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
LRCH3-202ENST00000414675 TNS3Q68CZ2 1445 aa19.2■□□□□ 0.66
LRCH3-202ENST00000414675 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
LRCH3-202ENST00000414675 C1orf141Q5JVX7 400 aa19.2■□□□□ 0.66
LRCH3-202ENST00000414675 EIF2S2P20042 333 aaKnown RBP19.19■□□□□ 0.66
LRCH3-202ENST00000414675 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
LRCH3-202ENST00000414675 SIPA1L3O60292 1781 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-202ENST00000414675 PLEKHM2Q8IWE5 1019 aa19.18■□□□□ 0.66
LRCH3-202ENST00000414675 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
LRCH3-202ENST00000414675 BCL11AQ9H165 835 aa19.18■□□□□ 0.66
LRCH3-202ENST00000414675 OTUD7AQ8TE49 926 aaPredicted RBP19.17■□□□□ 0.66
LRCH3-202ENST00000414675 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
LRCH3-202ENST00000414675 ADAMTS7Q9UKP4 1686 aa19.17■□□□□ 0.66
LRCH3-202ENST00000414675 SMARCA5O60264 1052 aaPredicted RBP19.17■□□□□ 0.66
LRCH3-202ENST00000414675 ZNF335Q9H4Z2 1342 aaPredicted RBP19.17■□□□□ 0.66
LRCH3-202ENST00000414675 APBB1O00213 710 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 CHPF2Q9P2E5 772 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 SPATA31A3Q5VYP0 1347 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 GNAI2P04899 355 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
LRCH3-202ENST00000414675 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
LRCH3-202ENST00000414675 HOXB7P09629 217 aa19.15■□□□□ 0.66
LRCH3-202ENST00000414675 ANXA1P04083 346 aa19.14■□□□□ 0.66
LRCH3-202ENST00000414675 BRINP3Q76B58 766 aa19.14■□□□□ 0.66
LRCH3-202ENST00000414675 MEGF6O75095 1541 aa19.14■□□□□ 0.65
LRCH3-202ENST00000414675 TBC1D9Q6ZT07 1266 aa19.13■□□□□ 0.65
LRCH3-202ENST00000414675 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
LRCH3-202ENST00000414675 HMMRO75330 724 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 GNAI3P08754 354 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 BECN1Q14457 450 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 RAPGEF4Q8WZA2 1011 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 TBC1D2Q9BYX2 928 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 HEG1Q9ULI3 1381 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
LRCH3-202ENST00000414675 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
LRCH3-202ENST00000414675 TTC22Q5TAA0 569 aa19.11■□□□□ 0.65
LRCH3-202ENST00000414675 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
LRCH3-202ENST00000414675 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
LRCH3-202ENST00000414675 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
LRCH3-202ENST00000414675 CSB-PGBD3P0DP91 1061 aa19.1■□□□□ 0.65
LRCH3-202ENST00000414675 USP35Q9P2H5 1018 aa19.09■□□□□ 0.65
LRCH3-202ENST00000414675 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
LRCH3-202ENST00000414675 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
LRCH3-202ENST00000414675 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
LRCH3-202ENST00000414675 PROSER3Q2NL68 480 aa19.09■□□□□ 0.65
LRCH3-202ENST00000414675 ABCC6O95255 1503 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 PI4KAP2A4QPH2 592 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 PHKG2P15735 406 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 RBM25P49756 843 aaKnown RBP19.08■□□□□ 0.65
LRCH3-202ENST00000414675 PI4KAP1Q8N8J0 262 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 ADCY9O60503 1353 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 CPDO75976 1380 aa19.08■□□□□ 0.65
LRCH3-202ENST00000414675 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.64
LRCH3-202ENST00000414675 CDC45O75419 566 aa19.07■□□□□ 0.64
LRCH3-202ENST00000414675 UBTFL1P0CB47 393 aaPredicted RBP19.07■□□□□ 0.64
LRCH3-202ENST00000414675 DNAAF4Q8WXU2 420 aa19.07■□□□□ 0.64
LRCH3-202ENST00000414675 NFKBIBQ15653 356 aa19.07■□□□□ 0.64
LRCH3-202ENST00000414675 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
LRCH3-202ENST00000414675 SLC39A6Q13433 755 aa19.06■□□□□ 0.64
LRCH3-202ENST00000414675 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
LRCH3-202ENST00000414675 SLAIN2Q9P270 581 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 SPG7Q9UQ90 795 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 C5P01031 1676 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
LRCH3-202ENST00000414675 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
LRCH3-202ENST00000414675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.05■□□□□ 0.643e-7■□□□□ 10.5
LRCH3-202ENST00000414675 CYP27B1O15528 508 aa19.04■□□□□ 0.64
LRCH3-202ENST00000414675 NBPF7P0C2Y1 421 aaPredicted RBP19.04■□□□□ 0.64
LRCH3-202ENST00000414675 SDSP20132 328 aa19.04■□□□□ 0.64
LRCH3-202ENST00000414675 NFATC2IPQ8NCF5 419 aa19.04■□□□□ 0.64
LRCH3-202ENST00000414675 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
LRCH3-202ENST00000414675 IBTKQ9P2D0 1353 aaPredicted RBP19.04■□□□□ 0.64
LRCH3-202ENST00000414675 KIF2CQ99661 725 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms