RNA–Protein interactions for RNA: ENST00000414510.5

PTPA-210, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-210	ENST00000414510	SIK1	P57059	783 aa		32.56	■■■□□ 2.8
PTPA-210	ENST00000414510	NFATC2IP	Q8NCF5	419 aa		32.56	■■■□□ 2.8
PTPA-210	ENST00000414510	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.55	■■■□□ 2.8
PTPA-210	ENST00000414510	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.55	■■■□□ 2.8
PTPA-210	ENST00000414510	MAP3K5	Q99683	1374 aa		32.55	■■■□□ 2.8
PTPA-210	ENST00000414510	PNPLA7	Q6ZV29	1317 aa		32.54	■■■□□ 2.8
PTPA-210	ENST00000414510	GAS2L2	Q8NHY3	880 aa		32.54	■■■□□ 2.8
PTPA-210	ENST00000414510	TFCP2L1	Q9NZI6	479 aa		32.54	■■■□□ 2.8
PTPA-210	ENST00000414510	SRCAP	Q6ZRS2	3230 aa		32.53	■■■□□ 2.8
PTPA-210	ENST00000414510	SLC52A2	Q9HAB3	445 aa		32.52	■■■□□ 2.8
PTPA-210	ENST00000414510	ZNF831	Q5JPB2	1677 aa		32.51	■■■□□ 2.79
PTPA-210	ENST00000414510	FCHSD2	O94868	740 aa		32.51	■■■□□ 2.79
PTPA-210	ENST00000414510	ITPK1	Q13572	414 aa		32.51	■■■□□ 2.79
PTPA-210	ENST00000414510	LINC00116	Q8NCU8	138 aa		32.51	■■■□□ 2.79
PTPA-210	ENST00000414510	SPON1	Q9HCB6	807 aa		32.51	■■■□□ 2.79
PTPA-210	ENST00000414510	SLC4A9	Q96Q91	983 aa		32.5	■■■□□ 2.79
PTPA-210	ENST00000414510	RBM42	Q9BTD8	480 aa	Known RBP	32.5	■■■□□ 2.79
PTPA-210	ENST00000414510	UBR3	Q6ZT12	1888 aa		32.5	■■■□□ 2.79
PTPA-210	ENST00000414510	COL5A3	P25940	1745 aa	Predicted RBP	32.49	■■■□□ 2.79
PTPA-210	ENST00000414510	ATP6V1A	P38606	617 aa		32.49	■■■□□ 2.79
PTPA-210	ENST00000414510	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.49	■■■□□ 2.79
PTPA-210	ENST00000414510	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.49	■■■□□ 2.79
PTPA-210	ENST00000414510	SIPA1L3	O60292	1781 aa	Predicted RBP	32.49	■■■□□ 2.79
PTPA-210	ENST00000414510	GNAT3	A8MTJ3	354 aa		32.48	■■■□□ 2.79
PTPA-210	ENST00000414510	TJP1	Q07157	1748 aa		32.47	■■■□□ 2.79
PTPA-210	ENST00000414510	PTCD1	O75127	700 aa	Known RBP	32.45	■■■□□ 2.79
PTPA-210	ENST00000414510	AMIGO3	Q86WK7	504 aa		32.45	■■■□□ 2.79
PTPA-210	ENST00000414510	IL17RE	Q8NFR9	667 aa		32.45	■■■□□ 2.79
PTPA-210	ENST00000414510	DLG5	Q8TDM6	1919 aa		32.45	■■■□□ 2.78
PTPA-210	ENST00000414510	SMIM5	Q71RC9	77 aa		32.44	■■■□□ 2.78
PTPA-210	ENST00000414510	AK7	Q96M32	723 aa		32.44	■■■□□ 2.78
PTPA-210	ENST00000414510	MTFR1L	Q9H019	292 aa		32.44	■■■□□ 2.78
PTPA-210	ENST00000414510	SLC39A6	Q13433	755 aa		32.43	■■■□□ 2.78
PTPA-210	ENST00000414510	CIC	Q96RK0	1608 aa	Predicted RBP	32.43	■■■□□ 2.78
PTPA-210	ENST00000414510	UBR2	Q8IWV8	1755 aa		32.42	■■■□□ 2.78
PTPA-210	ENST00000414510	KCP	Q6ZWJ8	1503 aa		32.42	■■■□□ 2.78
PTPA-210	ENST00000414510	PTGER2	P43116	358 aa		32.42	■■■□□ 2.78
PTPA-210	ENST00000414510	COL23A1	Q86Y22	540 aa	Predicted RBP	32.42	■■■□□ 2.78
PTPA-210	ENST00000414510	PLEKHF1	Q96S99	279 aa		32.41	■■■□□ 2.78
PTPA-210	ENST00000414510	COL24A1	Q17RW2	1714 aa		32.4	■■■□□ 2.78
PTPA-210	ENST00000414510	CEMIP	Q8WUJ3	1361 aa		32.4	■■■□□ 2.78
PTPA-210	ENST00000414510	MSH5	O43196	834 aa		32.39	■■■□□ 2.78
PTPA-210	ENST00000414510	PHF14	O94880	888 aa		32.38	■■■□□ 2.77
PTPA-210	ENST00000414510	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.38	■■■□□ 2.77
PTPA-210	ENST00000414510	HMGB2	P26583	209 aa	Known RBP	32.37	■■■□□ 2.77
PTPA-210	ENST00000414510	TEF	Q10587	303 aa		32.37	■■■□□ 2.77
PTPA-210	ENST00000414510	SGIP1	Q9BQI5	828 aa		32.37	■■■□□ 2.77
PTPA-210	ENST00000414510	MYH14	Q7Z406	1995 aa	Known RBP	32.37	■■■□□ 2.77
PTPA-210	ENST00000414510	GNPAT	O15228	680 aa		32.36	■■■□□ 2.77
PTPA-210	ENST00000414510	MCM10	Q7L590	875 aa		32.36	■■■□□ 2.77
PTPA-210	ENST00000414510	DCTN1	Q14203	1278 aa		32.35	■■■□□ 2.77
PTPA-210	ENST00000414510	NEFM	P07197	916 aa		32.34	■■■□□ 2.77
PTPA-210	ENST00000414510	SLC16A10	Q8TF71	515 aa		32.34	■■■□□ 2.77
PTPA-210	ENST00000414510	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.32	■■■□□ 2.76
PTPA-210	ENST00000414510	RTF1	Q92541	710 aa	Known RBP	32.32	■■■□□ 2.76
PTPA-210	ENST00000414510	CNTNAP4	Q9C0A0	1308 aa		32.31	■■■□□ 2.76
PTPA-210	ENST00000414510	MAPK8IP3	Q9UPT6	1336 aa		32.31	■■■□□ 2.76
PTPA-210	ENST00000414510	MSL1	Q68DK7	614 aa		32.31	■■■□□ 2.76
PTPA-210	ENST00000414510	SSFA2	P28290	1259 aa		32.3	■■■□□ 2.76
PTPA-210	ENST00000414510	DNAJC10	Q8IXB1	793 aa		32.3	■■■□□ 2.76
PTPA-210	ENST00000414510	FLAD1	Q8NFF5	587 aa		32.3	■■■□□ 2.76
PTPA-210	ENST00000414510	C4A	P0C0L4	1744 aa		32.29	■■■□□ 2.76
PTPA-210	ENST00000414510	NFE2L2	Q16236	605 aa		32.29	■■■□□ 2.76
PTPA-210	ENST00000414510	CRKL	P46109	303 aa	Known RBP	32.28	■■■□□ 2.76
PTPA-210	ENST00000414510	TTC5	Q8N0Z6	440 aa		32.28	■■■□□ 2.76
PTPA-210	ENST00000414510	PNN	Q9H307	717 aa	Known RBP	32.28	■■■□□ 2.76
PTPA-210	ENST00000414510	WDR43	Q15061	677 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
PTPA-210	ENST00000414510	CCDC146	Q8IYE0	955 aa		32.27	■■■□□ 2.76
PTPA-210	ENST00000414510	KCNQ3	O43525	872 aa		32.26	■■■□□ 2.75
PTPA-210	ENST00000414510	HTATSF1	O43719	755 aa	Known RBP	32.26	■■■□□ 2.75
PTPA-210	ENST00000414510	RC3H1	Q5TC82	1133 aa	Known RBP	32.26	■■■□□ 2.75
PTPA-210	ENST00000414510	ZNF790	Q6PG37	636 aa		32.26	■■■□□ 2.75
PTPA-210	ENST00000414510	BTBD11	A6QL63	1104 aa		32.25	■■■□□ 2.75
PTPA-210	ENST00000414510	RTCB	Q9Y3I0	505 aa	Known RBP	32.25	■■■□□ 2.75
PTPA-210	ENST00000414510	ZNF496	Q96IT1	587 aa	Predicted RBP	32.24	■■■□□ 2.75
PTPA-210	ENST00000414510	ARX	Q96QS3	562 aa		32.24	■■■□□ 2.75
PTPA-210	ENST00000414510	CCDC184	Q52MB2	194 aa		32.23	■■■□□ 2.75
PTPA-210	ENST00000414510	THUMPD2	Q9BTF0	503 aa	Known RBP	32.23	■■■□□ 2.75
PTPA-210	ENST00000414510	ADAMTS8	Q9UP79	889 aa		32.23	■■■□□ 2.75
PTPA-210	ENST00000414510	RPS6KA4	O75676	772 aa		32.22	■■■□□ 2.75
PTPA-210	ENST00000414510	POLD1	P28340	1107 aa		32.22	■■■□□ 2.75
PTPA-210	ENST00000414510	HEG1	Q9ULI3	1381 aa		32.21	■■■□□ 2.75
PTPA-210	ENST00000414510	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.21	■■■□□ 2.75
PTPA-210	ENST00000414510	CYP19A1	P11511	503 aa	Predicted RBP	32.2	■■■□□ 2.75
PTPA-210	ENST00000414510	INTS5	Q6P9B9	1019 aa	Known RBP	32.2	■■■□□ 2.75
PTPA-210	ENST00000414510	VSIG10	Q8N0Z9	540 aa		32.2	■■■□□ 2.75
PTPA-210	ENST00000414510	KDM3B	Q7LBC6	1761 aa		32.19	■■■□□ 2.74
PTPA-210	ENST00000414510	TRAPPC3L	Q5T215	181 aa		32.18	■■■□□ 2.74
PTPA-210	ENST00000414510	ARHGEF1	Q92888	912 aa	Known RBP	32.18	■■■□□ 2.74
PTPA-210	ENST00000414510	CCDC87	Q9NVE4	849 aa		32.18	■■■□□ 2.74
PTPA-210	ENST00000414510	RRP7A	Q9Y3A4	280 aa	Known RBP	32.18	■■■□□ 2.74
PTPA-210	ENST00000414510	ANP32C	O43423	234 aa		32.17	■■■□□ 2.74
PTPA-210	ENST00000414510	TMPO	P42166	694 aa	Known RBP	32.17	■■■□□ 2.74
PTPA-210	ENST00000414510	RIPK4	P57078	832 aa		32.16	■■■□□ 2.74
PTPA-210	ENST00000414510	FMNL2	Q96PY5	1086 aa		32.16	■■■□□ 2.74
PTPA-210	ENST00000414510	MIS18A	Q9NYP9	233 aa		32.16	■■■□□ 2.74
PTPA-210	ENST00000414510	ZBTB1	Q9Y2K1	713 aa		32.16	■■■□□ 2.74
PTPA-210	ENST00000414510	ADRA2B	P18089	450 aa		32.15	■■■□□ 2.74
PTPA-210	ENST00000414510	KLHL34	Q8N239	644 aa		32.15	■■■□□ 2.74
PTPA-210	ENST00000414510	RUNDC1	Q96C34	613 aa		32.15	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms