RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
SNRPE-202ENST00000414487 ATP10DQ9P241 1426 aa11.56□□□□□ -0.56
SNRPE-202ENST00000414487 FLT4P35916 1363 aa11.55□□□□□ -0.56
SNRPE-202ENST00000414487 CDC45O75419 566 aa11.55□□□□□ -0.56
SNRPE-202ENST00000414487 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
SNRPE-202ENST00000414487 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
SNRPE-202ENST00000414487 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
SNRPE-202ENST00000414487 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
SNRPE-202ENST00000414487 LRRC37A3O60309 1634 aa11.54□□□□□ -0.56
SNRPE-202ENST00000414487 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
SNRPE-202ENST00000414487 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
SNRPE-202ENST00000414487 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
SNRPE-202ENST00000414487 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
SNRPE-202ENST00000414487 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
SNRPE-202ENST00000414487 MCM4P33991 863 aa11.53□□□□□ -0.56
SNRPE-202ENST00000414487 DDIT3P35638 169 aa11.53□□□□□ -0.56
SNRPE-202ENST00000414487 HSP90AB2PQ58FF8 381 aa11.53□□□□□ -0.56
SNRPE-202ENST00000414487 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
SNRPE-202ENST00000414487 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
SNRPE-202ENST00000414487 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
SNRPE-202ENST00000414487 PIK3C2AO00443 1686 aa11.52□□□□□ -0.56
SNRPE-202ENST00000414487 L1TD1Q5T7N2 865 aaKnown RBP11.52□□□□□ -0.57
SNRPE-202ENST00000414487 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
SNRPE-202ENST00000414487 GAS2L2Q8NHY3 880 aa11.52□□□□□ -0.57
SNRPE-202ENST00000414487 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 MCM10Q7L590 875 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 THEMISQ8N1K5 641 aaPredicted RBP11.51□□□□□ -0.57
SNRPE-202ENST00000414487 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 MSH6P52701 1360 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
SNRPE-202ENST00000414487 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
SNRPE-202ENST00000414487 CCT4P50991 539 aaKnown RBP11.5□□□□□ -0.57
SNRPE-202ENST00000414487 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
SNRPE-202ENST00000414487 NGDNQ8NEJ9 315 aaKnown RBP11.5□□□□□ -0.57
SNRPE-202ENST00000414487 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
SNRPE-202ENST00000414487 RTF1Q92541 710 aaKnown RBP11.5□□□□□ -0.57
SNRPE-202ENST00000414487 KIF2CQ99661 725 aa11.5□□□□□ -0.57
SNRPE-202ENST00000414487 CEP170BQ9Y4F5 1589 aaPredicted RBP11.5□□□□□ -0.57
SNRPE-202ENST00000414487 HMMRO75330 724 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
SNRPE-202ENST00000414487 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
SNRPE-202ENST00000414487 PTMSP20962 102 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 IRX5P78411 483 aaPredicted RBP11.49□□□□□ -0.57
SNRPE-202ENST00000414487 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
SNRPE-202ENST00000414487 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 BABAM1Q9NWV8 329 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 BRPF3Q9ULD4 1205 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
SNRPE-202ENST00000414487 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
SNRPE-202ENST00000414487 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
SNRPE-202ENST00000414487 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
SNRPE-202ENST00000414487 AMPHP49418 695 aa11.48□□□□□ -0.57
SNRPE-202ENST00000414487 CEBPAP49715 358 aaPredicted RBP11.48□□□□□ -0.57
SNRPE-202ENST00000414487 EYA1Q99502 592 aa11.48□□□□□ -0.57
SNRPE-202ENST00000414487 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
SNRPE-202ENST00000414487 FAM208AQ9UK61 1670 aaKnown RBP11.47□□□□□ -0.57
SNRPE-202ENST00000414487 POTEMA6NI47 508 aa11.47□□□□□ -0.57
SNRPE-202ENST00000414487 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
SNRPE-202ENST00000414487 RABEP1Q15276 862 aa11.47□□□□□ -0.57
SNRPE-202ENST00000414487 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
SNRPE-202ENST00000414487 MEIS3Q99687 375 aa11.47□□□□□ -0.57
SNRPE-202ENST00000414487 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.57
SNRPE-202ENST00000414487 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
SNRPE-202ENST00000414487 FSD2A1L4K1 749 aa11.46□□□□□ -0.57
SNRPE-202ENST00000414487 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
SNRPE-202ENST00000414487 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.58
SNRPE-202ENST00000414487 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 FOXO3O43524 673 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 TRAK2O60296 914 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 PLCG2P16885 1265 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 RAB3GAP1Q15042 981 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
SNRPE-202ENST00000414487 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 STK31Q9BXU1 1019 aa11.45□□□□□ -0.58
SNRPE-202ENST00000414487 ISY1Q9ULR0 285 aaKnown RBP11.45□□□□□ -0.58
SNRPE-202ENST00000414487 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
SNRPE-202ENST00000414487 HOXC9P31274 260 aa11.44□□□□□ -0.58
SNRPE-202ENST00000414487 NLRP6P59044 892 aa11.44□□□□□ -0.58
SNRPE-202ENST00000414487 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
SNRPE-202ENST00000414487 OSBPL3Q9H4L5 887 aa11.44□□□□□ -0.58
SNRPE-202ENST00000414487 SOX12O15370 315 aa11.43□□□□□ -0.58
SNRPE-202ENST00000414487 GNAI2P04899 355 aa11.43□□□□□ -0.58
SNRPE-202ENST00000414487 GNAI3P08754 354 aa11.43□□□□□ -0.58
SNRPE-202ENST00000414487 G2E3Q7L622 706 aa11.43□□□□□ -0.58
SNRPE-202ENST00000414487 USP26Q9BXU7 913 aa11.43□□□□□ -0.58
SNRPE-202ENST00000414487 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
SNRPE-202ENST00000414487 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
SNRPE-202ENST00000414487 KCNA6P17658 529 aa11.42□□□□□ -0.58
SNRPE-202ENST00000414487 SDSP20132 328 aa11.42□□□□□ -0.58
SNRPE-202ENST00000414487 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
SNRPE-202ENST00000414487 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
SNRPE-202ENST00000414487 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
SNRPE-202ENST00000414487 TNPO1Q92973 898 aaKnown RBP11.42□□□□□ -0.58
SNRPE-202ENST00000414487 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
SNRPE-202ENST00000414487 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
SNRPE-202ENST00000414487 NFAT5O94916 1531 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms