RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
LINC00116-201ENST00000414416 GNAI1P63096 354 aa20.01■□□□□ 0.79
LINC00116-201ENST00000414416 SYTL4Q96C24 671 aaPredicted RBP20.01■□□□□ 0.79
LINC00116-201ENST00000414416 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
LINC00116-201ENST00000414416 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
LINC00116-201ENST00000414416 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
LINC00116-201ENST00000414416 TMOD3Q9NYL9 352 aa20.01■□□□□ 0.79
LINC00116-201ENST00000414416 KAT6BQ8WYB5 2073 aa20■□□□□ 0.79
LINC00116-201ENST00000414416 E9PSI1 815 aa20■□□□□ 0.79
LINC00116-201ENST00000414416 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
LINC00116-201ENST00000414416 FAM196AQ6ZSG2 479 aa20■□□□□ 0.79
LINC00116-201ENST00000414416 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
LINC00116-201ENST00000414416 BTBD11A6QL63 1104 aa19.99■□□□□ 0.79
LINC00116-201ENST00000414416 ZNF853P0CG23 659 aa19.99■□□□□ 0.79
LINC00116-201ENST00000414416 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
LINC00116-201ENST00000414416 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
LINC00116-201ENST00000414416 ITGB4P16144 1822 aa19.99■□□□□ 0.79
LINC00116-201ENST00000414416 CHL1O00533 1208 aa19.98■□□□□ 0.79
LINC00116-201ENST00000414416 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
LINC00116-201ENST00000414416 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
LINC00116-201ENST00000414416 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
LINC00116-201ENST00000414416 PIGBQ92521 554 aa19.98■□□□□ 0.79
LINC00116-201ENST00000414416 MBIPQ9NS73 344 aa19.97■□□□□ 0.79
LINC00116-201ENST00000414416 KCNQ2O43526 872 aa19.96■□□□□ 0.79
LINC00116-201ENST00000414416 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
LINC00116-201ENST00000414416 SUPT16HQ9Y5B9 1047 aaKnown RBP19.96■□□□□ 0.79
LINC00116-201ENST00000414416 FANCIQ9NVI1 1328 aa19.96■□□□□ 0.79
LINC00116-201ENST00000414416 ANP32EQ9BTT0 268 aa19.95■□□□□ 0.78
LINC00116-201ENST00000414416 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
LINC00116-201ENST00000414416 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
LINC00116-201ENST00000414416 NHSQ6T4R5 1651 aa19.94■□□□□ 0.78
LINC00116-201ENST00000414416 SLC39A6Q13433 755 aa19.94■□□□□ 0.78
LINC00116-201ENST00000414416 EP400Q96L91 3159 aa19.94■□□□□ 0.78
LINC00116-201ENST00000414416 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
LINC00116-201ENST00000414416 ZNF790Q6PG37 636 aa19.93■□□□□ 0.78
LINC00116-201ENST00000414416 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
LINC00116-201ENST00000414416 TTC5Q8N0Z6 440 aa19.93■□□□□ 0.78
LINC00116-201ENST00000414416 KCNQ3O43525 872 aa19.91■□□□□ 0.78
LINC00116-201ENST00000414416 BCL11BQ9C0K0 894 aaPredicted RBP19.91■□□□□ 0.78
LINC00116-201ENST00000414416 ASAP1Q9ULH1 1129 aa19.91■□□□□ 0.78
LINC00116-201ENST00000414416 PTF1AQ7RTS3 328 aa19.91■□□□□ 0.78
LINC00116-201ENST00000414416 ATG3Q9NT62 314 aa19.91■□□□□ 0.78
LINC00116-201ENST00000414416 TRIM37O94972 964 aa19.9■□□□□ 0.78
LINC00116-201ENST00000414416 PAPPAQ13219 1627 aa19.9■□□□□ 0.78
LINC00116-201ENST00000414416 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
LINC00116-201ENST00000414416 BTAF1O14981 1849 aa19.88■□□□□ 0.77
LINC00116-201ENST00000414416 FKBP8Q14318 412 aa19.88■□□□□ 0.77
LINC00116-201ENST00000414416 EXOSC9Q06265 439 aaKnown RBP19.88■□□□□ 0.77
LINC00116-201ENST00000414416 SMARCC1Q92922 1105 aaPredicted RBP19.87■□□□□ 0.77
LINC00116-201ENST00000414416 PTCD1O75127 700 aaKnown RBP19.87■□□□□ 0.77
LINC00116-201ENST00000414416 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
LINC00116-201ENST00000414416 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
LINC00116-201ENST00000414416 UBR2Q8IWV8 1755 aa19.86■□□□□ 0.77
LINC00116-201ENST00000414416 KRT24Q2M2I5 525 aa19.86■□□□□ 0.77
LINC00116-201ENST00000414416 PALLDQ8WX93 1383 aa19.86■□□□□ 0.77
LINC00116-201ENST00000414416 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
LINC00116-201ENST00000414416 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
LINC00116-201ENST00000414416 ELL2O00472 640 aaPredicted RBP19.85■□□□□ 0.77
LINC00116-201ENST00000414416 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
LINC00116-201ENST00000414416 HEG1Q9ULI3 1381 aa19.84■□□□□ 0.77
LINC00116-201ENST00000414416 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.77
LINC00116-201ENST00000414416 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
LINC00116-201ENST00000414416 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
LINC00116-201ENST00000414416 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
LINC00116-201ENST00000414416 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
LINC00116-201ENST00000414416 APBA3O96018 575 aa19.81■□□□□ 0.76
LINC00116-201ENST00000414416 NEFLP07196 543 aa19.81■□□□□ 0.76
LINC00116-201ENST00000414416 HOXB7P09629 217 aa19.81■□□□□ 0.76
LINC00116-201ENST00000414416 VSIG10Q8N0Z9 540 aa19.81■□□□□ 0.76
LINC00116-201ENST00000414416 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
LINC00116-201ENST00000414416 LOC102724428A0A0B4J2F2 783 aa19.8■□□□□ 0.76
LINC00116-201ENST00000414416 CT47B1P0C2W7 299 aaPredicted RBP19.8■□□□□ 0.76
LINC00116-201ENST00000414416 SIK1P57059 783 aa19.8■□□□□ 0.76
LINC00116-201ENST00000414416 TNS1Q9HBL0 1735 aaKnown RBP19.8■□□□□ 0.76
LINC00116-201ENST00000414416 VAMP4O75379 141 aa19.8■□□□□ 0.76
LINC00116-201ENST00000414416 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
LINC00116-201ENST00000414416 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
LINC00116-201ENST00000414416 ATP6V1AP38606 617 aa19.79■□□□□ 0.76
LINC00116-201ENST00000414416 C5P01031 1676 aa19.78■□□□□ 0.76
LINC00116-201ENST00000414416 LY75O60449 1722 aa19.77■□□□□ 0.76
LINC00116-201ENST00000414416 SF3B2Q13435 895 aaKnown RBP19.77■□□□□ 0.76
LINC00116-201ENST00000414416 TEX13AQ9BXU3 409 aaPredicted RBP19.77■□□□□ 0.76
LINC00116-201ENST00000414416 PLSCR1O15162 318 aa19.77■□□□□ 0.75
LINC00116-201ENST00000414416 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.75
LINC00116-201ENST00000414416 HDGFL1Q5TGJ6 251 aa19.77■□□□□ 0.75
LINC00116-201ENST00000414416 ZNF428Q96B54 188 aa19.77■□□□□ 0.75
LINC00116-201ENST00000414416 USP16Q9Y5T5 823 aa19.77■□□□□ 0.75
LINC00116-201ENST00000414416 DNAJC10Q8IXB1 793 aa19.76■□□□□ 0.75
LINC00116-201ENST00000414416 CHMP4AQ9BY43 222 aa19.76■□□□□ 0.75
LINC00116-201ENST00000414416 CCNL1Q9UK58 526 aaPredicted RBP19.76■□□□□ 0.75
LINC00116-201ENST00000414416 NECTIN2Q92692 538 aa19.75■□□□□ 0.75
LINC00116-201ENST00000414416 ZNF831Q5JPB2 1677 aa19.75■□□□□ 0.75
LINC00116-201ENST00000414416 LAMB4A4D0S4 1761 aa19.75■□□□□ 0.75
LINC00116-201ENST00000414416 TJP1Q07157 1748 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
LINC00116-201ENST00000414416 STARD3NLO95772 234 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 KCNQ4P56696 695 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 ITPK1Q13572 414 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 CCDC125Q86Z20 511 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms