RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 LGR6Q9HBX8 967 aa19.49■□□□□ 0.71
CHD1-202ENST00000414220 KCNQ4P56696 695 aa19.48■□□□□ 0.71
CHD1-202ENST00000414220 TOGARAM1Q9Y4F4 1720 aa19.48■□□□□ 0.71
CHD1-202ENST00000414220 ITGB4P16144 1822 aa19.47■□□□□ 0.71
CHD1-202ENST00000414220 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
CHD1-202ENST00000414220 FLAD1Q8NFF5 587 aa19.47■□□□□ 0.71
CHD1-202ENST00000414220 AKT1S1Q96B36 256 aa19.47■□□□□ 0.71
CHD1-202ENST00000414220 SPON1Q9HCB6 807 aa19.47■□□□□ 0.71
CHD1-202ENST00000414220 AK7Q96M32 723 aa19.46■□□□□ 0.71
CHD1-202ENST00000414220 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
CHD1-202ENST00000414220 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
CHD1-202ENST00000414220 LY75O60449 1722 aa19.45■□□□□ 0.7
CHD1-202ENST00000414220 MSH5O43196 834 aa19.44■□□□□ 0.7
CHD1-202ENST00000414220 SLC16A10Q8TF71 515 aa19.44■□□□□ 0.7
CHD1-202ENST00000414220 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
CHD1-202ENST00000414220 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
CHD1-202ENST00000414220 PLEKHF1Q96S99 279 aa19.42■□□□□ 0.7
CHD1-202ENST00000414220 PPP1R1BQ9UD71 204 aaPredicted RBP19.42■□□□□ 0.7
CHD1-202ENST00000414220 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
CHD1-202ENST00000414220 MTFR1LQ9H019 292 aa19.41■□□□□ 0.7
CHD1-202ENST00000414220 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
CHD1-202ENST00000414220 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
CHD1-202ENST00000414220 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
CHD1-202ENST00000414220 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.7
CHD1-202ENST00000414220 BTBD11A6QL63 1104 aa19.39■□□□□ 0.69
CHD1-202ENST00000414220 LINC00116Q8NCU8 138 aa19.39■□□□□ 0.69
CHD1-202ENST00000414220 MRC1P22897 1456 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 ITPK1Q13572 414 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
CHD1-202ENST00000414220 PNPLA7Q6ZV29 1317 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 MCM10Q7L590 875 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 RUNDC1Q96C34 613 aa19.38■□□□□ 0.69
CHD1-202ENST00000414220 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
CHD1-202ENST00000414220 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
CHD1-202ENST00000414220 GNPATO15228 680 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 SSFA2P28290 1259 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 POLD1P28340 1107 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 ZNF790Q6PG37 636 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 VSIG10Q8N0Z9 540 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
CHD1-202ENST00000414220 TEX13AQ9BXU3 409 aaPredicted RBP19.37■□□□□ 0.69
CHD1-202ENST00000414220 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
CHD1-202ENST00000414220 RIPK4P57078 832 aa19.36■□□□□ 0.69
CHD1-202ENST00000414220 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
CHD1-202ENST00000414220 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
CHD1-202ENST00000414220 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
CHD1-202ENST00000414220 PHF14O94880 888 aa19.35■□□□□ 0.69
CHD1-202ENST00000414220 TRAPPC3LQ5T215 181 aa19.35■□□□□ 0.69
CHD1-202ENST00000414220 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
CHD1-202ENST00000414220 FMNL2Q96PY5 1086 aa19.35■□□□□ 0.69
CHD1-202ENST00000414220 SLC4A9Q96Q91 983 aa19.35■□□□□ 0.69
CHD1-202ENST00000414220 C5P01031 1676 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.34■□□□□ 0.69
CHD1-202ENST00000414220 STARD3NLO95772 234 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 ADRA2BP18089 450 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 CCDC146Q8IYE0 955 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
CHD1-202ENST00000414220 ADAMTS7Q9UKP4 1686 aa19.33■□□□□ 0.69
CHD1-202ENST00000414220 LRP5O75197 1615 aa19.33■□□□□ 0.69
CHD1-202ENST00000414220 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
CHD1-202ENST00000414220 C4BP0C0L5 1744 aa19.33■□□□□ 0.68
CHD1-202ENST00000414220 RPS6KA4O75676 772 aa19.32■□□□□ 0.68
CHD1-202ENST00000414220 DNAJC10Q8IXB1 793 aa19.32■□□□□ 0.68
CHD1-202ENST00000414220 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
CHD1-202ENST00000414220 CRKLP46109 303 aaKnown RBP19.31■□□□□ 0.68
CHD1-202ENST00000414220 NEUROD2Q15784 382 aa19.31■□□□□ 0.68
CHD1-202ENST00000414220 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
CHD1-202ENST00000414220 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
CHD1-202ENST00000414220 RFC4P35249 363 aa19.3■□□□□ 0.68
CHD1-202ENST00000414220 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
CHD1-202ENST00000414220 CCDC87Q9NVE4 849 aa19.3■□□□□ 0.68
CHD1-202ENST00000414220 HEG1Q9ULI3 1381 aa19.3■□□□□ 0.68
CHD1-202ENST00000414220 QSER1Q2KHR3 1735 aa19.29■□□□□ 0.68
CHD1-202ENST00000414220 ARXQ96QS3 562 aa19.29■□□□□ 0.68
CHD1-202ENST00000414220 TAF1LQ8IZX4 1826 aa19.29■□□□□ 0.68
CHD1-202ENST00000414220 SNRPA1P09661 255 aaKnown RBP19.28■□□□□ 0.68
CHD1-202ENST00000414220 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
CHD1-202ENST00000414220 PTGER2P43116 358 aa19.28■□□□□ 0.68
CHD1-202ENST00000414220 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
CHD1-202ENST00000414220 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
CHD1-202ENST00000414220 BABAM1Q9NWV8 329 aa19.27■□□□□ 0.68
CHD1-202ENST00000414220 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
CHD1-202ENST00000414220 CALD1Q05682 793 aaKnown RBP19.26■□□□□ 0.67
CHD1-202ENST00000414220 NLGN1Q8N2Q7 840 aa19.26■□□□□ 0.67
CHD1-202ENST00000414220 ARHGEF1Q92888 912 aaKnown RBP19.26■□□□□ 0.67
CHD1-202ENST00000414220 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
CHD1-202ENST00000414220 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
CHD1-202ENST00000414220 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
CHD1-202ENST00000414220 A0A087WZG4 1122 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 APAF1O14727 1248 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 KCNQ3O43525 872 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 ZPR1O75312 459 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 MSL1Q68DK7 614 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 INTS5Q6P9B9 1019 aaKnown RBP19.24■□□□□ 0.67
CHD1-202ENST00000414220 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
CHD1-202ENST00000414220 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms