RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
HLA-DMB-257ENST00000414017 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-257ENST00000414017 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
HLA-DMB-257ENST00000414017 TNS1Q9HBL0 1735 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-257ENST00000414017 BTAF1O14981 1849 aa13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 ITGB4P16144 1822 aa13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 SCN11AQ9UI33 1791 aa13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 SLC39A6Q13433 755 aa13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 ASAP1Q9ULH1 1129 aa13.69□□□□□ -0.22
HLA-DMB-257ENST00000414017 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
HLA-DMB-257ENST00000414017 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
HLA-DMB-257ENST00000414017 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
HLA-DMB-257ENST00000414017 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-257ENST00000414017 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
HLA-DMB-257ENST00000414017 PTCD1O75127 700 aaKnown RBP13.67□□□□□ -0.22
HLA-DMB-257ENST00000414017 KCNQ4P56696 695 aa13.67□□□□□ -0.22
HLA-DMB-257ENST00000414017 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
HLA-DMB-257ENST00000414017 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-257ENST00000414017 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
HLA-DMB-257ENST00000414017 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
HLA-DMB-257ENST00000414017 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMB-257ENST00000414017 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
HLA-DMB-257ENST00000414017 CAMKK2Q96RR4 588 aa13.65□□□□□ -0.22
HLA-DMB-257ENST00000414017 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
HLA-DMB-257ENST00000414017 MRC1P22897 1456 aa13.65□□□□□ -0.22
HLA-DMB-257ENST00000414017 PLSCR1O15162 318 aa13.64□□□□□ -0.23
HLA-DMB-257ENST00000414017 KCNQ3O43525 872 aa13.64□□□□□ -0.23
HLA-DMB-257ENST00000414017 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
HLA-DMB-257ENST00000414017 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
HLA-DMB-257ENST00000414017 ATP6V1AP38606 617 aa13.63□□□□□ -0.23
HLA-DMB-257ENST00000414017 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-DMB-257ENST00000414017 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
HLA-DMB-257ENST00000414017 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 SIK1P57059 783 aa13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 PROM2Q8N271 834 aa13.62□□□□□ -0.23
HLA-DMB-257ENST00000414017 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
HLA-DMB-257ENST00000414017 CCDC27Q2M243 656 aa13.6□□□□□ -0.23
HLA-DMB-257ENST00000414017 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
HLA-DMB-257ENST00000414017 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
HLA-DMB-257ENST00000414017 FMNL2Q96PY5 1086 aa13.6□□□□□ -0.23
HLA-DMB-257ENST00000414017 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
HLA-DMB-257ENST00000414017 GNAI1P63096 354 aa13.59□□□□□ -0.23
HLA-DMB-257ENST00000414017 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
HLA-DMB-257ENST00000414017 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
HLA-DMB-257ENST00000414017 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 ITPK1Q13572 414 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
HLA-DMB-257ENST00000414017 LY75O60449 1722 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 NGEFQ8N5V2 710 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 AK7Q96M32 723 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 STK32BQ9NY57 414 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 KCPQ6ZWJ8 1503 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
HLA-DMB-257ENST00000414017 RGPD3A6NKT7 1758 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 RGPD4Q7Z3J3 1758 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 PRAMEF22A3QJZ6 481 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 CHL1O00533 1208 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 WDR63Q8IWG1 891 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 RREB1Q92766 1687 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
HLA-DMB-257ENST00000414017 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 ELL2O00472 640 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 PHF14O94880 888 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
HLA-DMB-257ENST00000414017 GNPATO15228 680 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 ZNF853P0CG23 659 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 IL16Q14005 1332 aa13.54□□□□□ -0.24
HLA-DMB-257ENST00000414017 C5P01031 1676 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 STARD3NLO95772 234 aa13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-257ENST00000414017 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms