RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 FBLN1P23142 703 aa11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 RTL1A6NKG5 1358 aa11.61□□□□□ -0.55
UPF3AP1-201ENST00000413731 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
UPF3AP1-201ENST00000413731 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
UPF3AP1-201ENST00000413731 CCNL1Q9UK58 526 aaPredicted RBP11.6□□□□□ -0.55
UPF3AP1-201ENST00000413731 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
UPF3AP1-201ENST00000413731 AMPHP49418 695 aa11.59□□□□□ -0.55
UPF3AP1-201ENST00000413731 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
UPF3AP1-201ENST00000413731 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 USP47Q96K76 1375 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 USHBP1Q8N6Y0 703 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 COG3Q96JB2 828 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 TESK2Q96S53 571 aa11.58□□□□□ -0.56
UPF3AP1-201ENST00000413731 RRS1Q15050 365 aaKnown RBP11.57□□□□□ -0.56
UPF3AP1-201ENST00000413731 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
UPF3AP1-201ENST00000413731 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
UPF3AP1-201ENST00000413731 SMG6Q86US8 1419 aaKnown RBP11.57□□□□□ -0.56
UPF3AP1-201ENST00000413731 NBPF6Q5VWK0 638 aa11.56□□□□□ -0.56
UPF3AP1-201ENST00000413731 NBPF4Q96M43 638 aa11.56□□□□□ -0.56
UPF3AP1-201ENST00000413731 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
UPF3AP1-201ENST00000413731 ADCY9O60503 1353 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 PYGBP11216 843 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
UPF3AP1-201ENST00000413731 ST20-MTHFSA0A0A6YYL1 179 aa11.54□□□□□ -0.56
UPF3AP1-201ENST00000413731 GRIN3BO60391 1043 aa11.54□□□□□ -0.56
UPF3AP1-201ENST00000413731 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
UPF3AP1-201ENST00000413731 PCDH11XQ9BZA7 1347 aa11.54□□□□□ -0.56
UPF3AP1-201ENST00000413731 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
UPF3AP1-201ENST00000413731 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 RAPGEF4Q8WZA2 1011 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 GGNBP2Q9H3C7 697 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 CGNL1Q0VF96 1302 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 FLT4P35916 1363 aa11.53□□□□□ -0.56
UPF3AP1-201ENST00000413731 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
UPF3AP1-201ENST00000413731 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
UPF3AP1-201ENST00000413731 INSRP06213 1382 aa11.52□□□□□ -0.57
UPF3AP1-201ENST00000413731 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
UPF3AP1-201ENST00000413731 FYB1O15117 783 aa11.51□□□□□ -0.57
UPF3AP1-201ENST00000413731 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
UPF3AP1-201ENST00000413731 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
UPF3AP1-201ENST00000413731 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
UPF3AP1-201ENST00000413731 CYP27B1O15528 508 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 MPRIPQ6WCQ1 1025 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 CD2APQ9Y5K6 639 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
UPF3AP1-201ENST00000413731 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 PHF14O94880 888 aa11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 ZNF526Q8TF50 670 aaPredicted RBP11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 AK7Q96M32 723 aa11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
UPF3AP1-201ENST00000413731 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
UPF3AP1-201ENST00000413731 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
UPF3AP1-201ENST00000413731 KIF24Q5T7B8 1368 aa11.48□□□□□ -0.57
UPF3AP1-201ENST00000413731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
UPF3AP1-201ENST00000413731 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
UPF3AP1-201ENST00000413731 EMILIN1Q9Y6C2 1016 aa11.47□□□□□ -0.57
UPF3AP1-201ENST00000413731 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
UPF3AP1-201ENST00000413731 PIGBQ92521 554 aa11.46□□□□□ -0.57
UPF3AP1-201ENST00000413731 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
UPF3AP1-201ENST00000413731 MYH14Q7Z406 1995 aaKnown RBP11.46□□□□□ -0.58
UPF3AP1-201ENST00000413731 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.58
UPF3AP1-201ENST00000413731 ARFGEF1Q9Y6D6 1849 aa11.45□□□□□ -0.58
UPF3AP1-201ENST00000413731 HSPA6P17066 643 aa11.45□□□□□ -0.58
UPF3AP1-201ENST00000413731 TMF1P82094 1093 aa11.45□□□□□ -0.58
UPF3AP1-201ENST00000413731 KDRP35968 1356 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 SSFA2P28290 1259 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 SIK1P57059 783 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 ITPK1Q13572 414 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
UPF3AP1-201ENST00000413731 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
UPF3AP1-201ENST00000413731 GNPATO15228 680 aa11.43□□□□□ -0.58
UPF3AP1-201ENST00000413731 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
UPF3AP1-201ENST00000413731 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
UPF3AP1-201ENST00000413731 KIF3CO14782 793 aa11.42□□□□□ -0.58
UPF3AP1-201ENST00000413731 HMGB2P26583 209 aaKnown RBP11.42□□□□□ -0.58
UPF3AP1-201ENST00000413731 TMOD3Q9NYL9 352 aa11.42□□□□□ -0.58
UPF3AP1-201ENST00000413731 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
UPF3AP1-201ENST00000413731 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
UPF3AP1-201ENST00000413731 TJP1Q07157 1748 aa11.41□□□□□ -0.58
UPF3AP1-201ENST00000413731 PPM1GO15355 546 aaPredicted RBP11.41□□□□□ -0.58
UPF3AP1-201ENST00000413731 MMP10P09238 476 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms