RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 MCM10Q7L590 875 aa17.28■□□□□ 0.36
SF1-206ENST00000413725 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
SF1-206ENST00000413725 APBA3O96018 575 aa17.27■□□□□ 0.36
SF1-206ENST00000413725 DCTN1Q14203 1278 aa17.27■□□□□ 0.36
SF1-206ENST00000413725 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.36
SF1-206ENST00000413725 PIGBQ92521 554 aa17.27■□□□□ 0.36
SF1-206ENST00000413725 UBR2Q8IWV8 1755 aa17.27■□□□□ 0.35
SF1-206ENST00000413725 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
SF1-206ENST00000413725 BAG6P46379 1132 aa17.26■□□□□ 0.35
SF1-206ENST00000413725 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
SF1-206ENST00000413725 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
SF1-206ENST00000413725 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
SF1-206ENST00000413725 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
SF1-206ENST00000413725 TAF1LQ8IZX4 1826 aa17.25■□□□□ 0.35
SF1-206ENST00000413725 RREB1Q92766 1687 aa17.24■□□□□ 0.35
SF1-206ENST00000413725 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
SF1-206ENST00000413725 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
SF1-206ENST00000413725 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
SF1-206ENST00000413725 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
SF1-206ENST00000413725 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
SF1-206ENST00000413725 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
SF1-206ENST00000413725 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
SF1-206ENST00000413725 PLSCR1O15162 318 aa17.22■□□□□ 0.35
SF1-206ENST00000413725 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
SF1-206ENST00000413725 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
SF1-206ENST00000413725 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
SF1-206ENST00000413725 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
SF1-206ENST00000413725 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
SF1-206ENST00000413725 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
SF1-206ENST00000413725 C5P01031 1676 aa17.2■□□□□ 0.34
SF1-206ENST00000413725 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
SF1-206ENST00000413725 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
SF1-206ENST00000413725 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
SF1-206ENST00000413725 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
SF1-206ENST00000413725 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
SF1-206ENST00000413725 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
SF1-206ENST00000413725 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
SF1-206ENST00000413725 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
SF1-206ENST00000413725 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
SF1-206ENST00000413725 COL5A3P25940 1745 aaPredicted RBP17.18■□□□□ 0.34
SF1-206ENST00000413725 TJP1Q07157 1748 aa17.17■□□□□ 0.34
SF1-206ENST00000413725 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
SF1-206ENST00000413725 SLC27A3Q5K4L6 730 aa17.17■□□□□ 0.34
SF1-206ENST00000413725 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
SF1-206ENST00000413725 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
SF1-206ENST00000413725 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
SF1-206ENST00000413725 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
SF1-206ENST00000413725 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
SF1-206ENST00000413725 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
SF1-206ENST00000413725 SIK1P57059 783 aa17.16■□□□□ 0.34
SF1-206ENST00000413725 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
SF1-206ENST00000413725 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
SF1-206ENST00000413725 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
SF1-206ENST00000413725 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
SF1-206ENST00000413725 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
SF1-206ENST00000413725 GNAI1P63096 354 aa17.15■□□□□ 0.34
SF1-206ENST00000413725 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
SF1-206ENST00000413725 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
SF1-206ENST00000413725 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
SF1-206ENST00000413725 IFT57Q9NWB7 429 aa17.15■□□□□ 0.34
SF1-206ENST00000413725 IL16Q14005 1332 aa17.15■□□□□ 0.34
SF1-206ENST00000413725 MSH5O43196 834 aa17.14■□□□□ 0.33
SF1-206ENST00000413725 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
SF1-206ENST00000413725 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
SF1-206ENST00000413725 MYH14Q7Z406 1995 aaKnown RBP17.14■□□□□ 0.33
SF1-206ENST00000413725 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
SF1-206ENST00000413725 CHL1O00533 1208 aa17.13■□□□□ 0.33
SF1-206ENST00000413725 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
SF1-206ENST00000413725 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 KCNQ3O43525 872 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 PROM2Q8N271 834 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
SF1-206ENST00000413725 ZNF521Q96K83 1311 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
SF1-206ENST00000413725 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
SF1-206ENST00000413725 QSER1Q2KHR3 1735 aa17.11■□□□□ 0.33
SF1-206ENST00000413725 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
SF1-206ENST00000413725 UBR3Q6ZT12 1888 aa17.11■□□□□ 0.33
SF1-206ENST00000413725 KCNQ4P56696 695 aa17.1■□□□□ 0.33
SF1-206ENST00000413725 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
SF1-206ENST00000413725 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
SF1-206ENST00000413725 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
SF1-206ENST00000413725 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
SF1-206ENST00000413725 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
SF1-206ENST00000413725 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
SF1-206ENST00000413725 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
SF1-206ENST00000413725 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
SF1-206ENST00000413725 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
SF1-206ENST00000413725 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
SF1-206ENST00000413725 ITPK1Q13572 414 aa17.07■□□□□ 0.32
SF1-206ENST00000413725 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
SF1-206ENST00000413725 E9PSI1 815 aa17.06■□□□□ 0.32
SF1-206ENST00000413725 STARD3NLO95772 234 aa17.06■□□□□ 0.32
SF1-206ENST00000413725 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
SF1-206ENST00000413725 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
SF1-206ENST00000413725 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
SF1-206ENST00000413725 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
SF1-206ENST00000413725 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
SF1-206ENST00000413725 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms