RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 FMN2Q9NZ56 1722 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
TTC39A-208ENST00000413473 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 LRRCC1Q9C099 1032 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 GNAI3P08754 354 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
TTC39A-208ENST00000413473 ATP8B2P98198 1209 aa18.35■□□□□ 0.53
TTC39A-208ENST00000413473 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
TTC39A-208ENST00000413473 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
TTC39A-208ENST00000413473 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
TTC39A-208ENST00000413473 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
TTC39A-208ENST00000413473 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
TTC39A-208ENST00000413473 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.53
TTC39A-208ENST00000413473 MX1P20591 662 aa18.33■□□□□ 0.53
TTC39A-208ENST00000413473 NEK4P51957 841 aa18.33■□□□□ 0.53
TTC39A-208ENST00000413473 LTV1Q96GA3 475 aaPredicted RBP18.33■□□□□ 0.53
TTC39A-208ENST00000413473 ESPNB1AK53 854 aa18.33■□□□□ 0.52
TTC39A-208ENST00000413473 HOXC9P31274 260 aa18.33■□□□□ 0.52
TTC39A-208ENST00000413473 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
TTC39A-208ENST00000413473 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
TTC39A-208ENST00000413473 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
TTC39A-208ENST00000413473 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
TTC39A-208ENST00000413473 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
TTC39A-208ENST00000413473 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
TTC39A-208ENST00000413473 TRIM6-TRIM34B2RNG4 842 aa18.31■□□□□ 0.52
TTC39A-208ENST00000413473 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
TTC39A-208ENST00000413473 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
TTC39A-208ENST00000413473 NASPP49321 788 aaPredicted RBP18.3■□□□□ 0.52
TTC39A-208ENST00000413473 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
TTC39A-208ENST00000413473 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
TTC39A-208ENST00000413473 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
TTC39A-208ENST00000413473 PIK3C2AO00443 1686 aa18.3■□□□□ 0.52
TTC39A-208ENST00000413473 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
TTC39A-208ENST00000413473 CHMLP26374 656 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 TMX3Q96JJ7 454 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
TTC39A-208ENST00000413473 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
TTC39A-208ENST00000413473 ZNF445P59923 1031 aa18.28■□□□□ 0.52
TTC39A-208ENST00000413473 ZSCAN23Q3MJ62 389 aa18.28■□□□□ 0.52
TTC39A-208ENST00000413473 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
TTC39A-208ENST00000413473 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
TTC39A-208ENST00000413473 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
TTC39A-208ENST00000413473 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.52
TTC39A-208ENST00000413473 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
TTC39A-208ENST00000413473 MCCP23508 829 aa18.27■□□□□ 0.51
TTC39A-208ENST00000413473 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.51
TTC39A-208ENST00000413473 FOXD4L5Q5VV16 416 aaPredicted RBP18.27■□□□□ 0.51
TTC39A-208ENST00000413473 FOXD4L4Q8WXT5 416 aaPredicted RBP18.27■□□□□ 0.51
TTC39A-208ENST00000413473 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.51
TTC39A-208ENST00000413473 CACNA1FO60840 1977 aa18.27■□□□□ 0.51
TTC39A-208ENST00000413473 CCDC173Q0VFZ6 552 aa18.26■□□□□ 0.51
TTC39A-208ENST00000413473 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
TTC39A-208ENST00000413473 SRCIN1Q9C0H9 1055 aa18.26■□□□□ 0.51
TTC39A-208ENST00000413473 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
TTC39A-208ENST00000413473 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
TTC39A-208ENST00000413473 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
TTC39A-208ENST00000413473 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
TTC39A-208ENST00000413473 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
TTC39A-208ENST00000413473 SLIT1O75093 1534 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 KCNA6P17658 529 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 MCM2P49736 904 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 PPP1R9BQ96SB3 815 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
TTC39A-208ENST00000413473 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 ANP32BQ92688 251 aaKnown RBP18.25■□□□□ 0.51
TTC39A-208ENST00000413473 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
TTC39A-208ENST00000413473 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
TTC39A-208ENST00000413473 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
TTC39A-208ENST00000413473 ANAPC15P60006 121 aa18.24■□□□□ 0.51
TTC39A-208ENST00000413473 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
TTC39A-208ENST00000413473 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
TTC39A-208ENST00000413473 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
TTC39A-208ENST00000413473 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
TTC39A-208ENST00000413473 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
TTC39A-208ENST00000413473 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
TTC39A-208ENST00000413473 CUL4AQ13619 759 aa18.22■□□□□ 0.51
TTC39A-208ENST00000413473 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
TTC39A-208ENST00000413473 IL25Q9H293 177 aa18.22■□□□□ 0.51
TTC39A-208ENST00000413473 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
TTC39A-208ENST00000413473 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
TTC39A-208ENST00000413473 RBSNQ9H1K0 784 aa18.21■□□□□ 0.51
TTC39A-208ENST00000413473 BRD1O95696 1058 aa18.21■□□□□ 0.5
TTC39A-208ENST00000413473 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.5
TTC39A-208ENST00000413473 LGR6Q9HBX8 967 aa18.21■□□□□ 0.5
TTC39A-208ENST00000413473 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
TTC39A-208ENST00000413473 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
TTC39A-208ENST00000413473 AOX1Q06278 1338 aa18.2■□□□□ 0.5
TTC39A-208ENST00000413473 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
TTC39A-208ENST00000413473 RHPN1Q8TCX5 695 aa18.2■□□□□ 0.5
TTC39A-208ENST00000413473 SETD1BQ9UPS6 1966 aaKnown RBP18.2■□□□□ 0.5
TTC39A-208ENST00000413473 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
TTC39A-208ENST00000413473 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
TTC39A-208ENST00000413473 POLA2Q14181 598 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms