RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 CEMIPQ8WUJ3 1361 aa19.6■□□□□ 0.73
PUDP-202ENST00000412827 TOGARAM1Q9Y4F4 1720 aa19.59■□□□□ 0.73
PUDP-202ENST00000412827 CABP4P57796 275 aa19.59■□□□□ 0.73
PUDP-202ENST00000412827 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.73
PUDP-202ENST00000412827 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.73
PUDP-202ENST00000412827 GNAI1P63096 354 aa19.57■□□□□ 0.72
PUDP-202ENST00000412827 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
PUDP-202ENST00000412827 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
PUDP-202ENST00000412827 SLC52A2Q9HAB3 445 aa19.57■□□□□ 0.72
PUDP-202ENST00000412827 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
PUDP-202ENST00000412827 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
PUDP-202ENST00000412827 FKBP8Q14318 412 aa19.56■□□□□ 0.72
PUDP-202ENST00000412827 MCM10Q7L590 875 aa19.56■□□□□ 0.72
PUDP-202ENST00000412827 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
PUDP-202ENST00000412827 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
PUDP-202ENST00000412827 IL17REQ8NFR9 667 aa19.55■□□□□ 0.72
PUDP-202ENST00000412827 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
PUDP-202ENST00000412827 SBF2Q86WG5 1849 aa19.54■□□□□ 0.72
PUDP-202ENST00000412827 TRIM37O94972 964 aa19.54■□□□□ 0.72
PUDP-202ENST00000412827 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
PUDP-202ENST00000412827 SMARCC1Q92922 1105 aaPredicted RBP19.54■□□□□ 0.72
PUDP-202ENST00000412827 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
PUDP-202ENST00000412827 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
PUDP-202ENST00000412827 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
PUDP-202ENST00000412827 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
PUDP-202ENST00000412827 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.72
PUDP-202ENST00000412827 DCTN1Q14203 1278 aa19.52■□□□□ 0.72
PUDP-202ENST00000412827 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
PUDP-202ENST00000412827 ITGB4P16144 1822 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 ILDR2Q71H61 639 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 NFATC2IPQ8NCF5 419 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 BABAM1Q9NWV8 329 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 BTAF1O14981 1849 aa19.51■□□□□ 0.71
PUDP-202ENST00000412827 KCNQ2O43526 872 aa19.5■□□□□ 0.71
PUDP-202ENST00000412827 HMGB2P26583 209 aaKnown RBP19.5■□□□□ 0.71
PUDP-202ENST00000412827 BAG6P46379 1132 aa19.5■□□□□ 0.71
PUDP-202ENST00000412827 TAF7Q15545 349 aaPredicted RBP19.5■□□□□ 0.71
PUDP-202ENST00000412827 PIGBQ92521 554 aa19.5■□□□□ 0.71
PUDP-202ENST00000412827 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
PUDP-202ENST00000412827 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
PUDP-202ENST00000412827 THUMPD2Q9BTF0 503 aaKnown RBP19.49■□□□□ 0.71
PUDP-202ENST00000412827 RGPD3A6NKT7 1758 aaPredicted RBP19.49■□□□□ 0.71
PUDP-202ENST00000412827 RGPD4Q7Z3J3 1758 aa19.49■□□□□ 0.71
PUDP-202ENST00000412827 PAPPAQ13219 1627 aa19.48■□□□□ 0.71
PUDP-202ENST00000412827 PALLDQ8WX93 1383 aa19.48■□□□□ 0.71
PUDP-202ENST00000412827 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
PUDP-202ENST00000412827 APBA3O96018 575 aa19.47■□□□□ 0.71
PUDP-202ENST00000412827 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
PUDP-202ENST00000412827 CHL1O00533 1208 aa19.45■□□□□ 0.7
PUDP-202ENST00000412827 PLSCR1O15162 318 aa19.44■□□□□ 0.7
PUDP-202ENST00000412827 RARSP54136 660 aaKnown RBP19.44■□□□□ 0.7
PUDP-202ENST00000412827 EXOSC9Q06265 439 aaKnown RBP19.44■□□□□ 0.7
PUDP-202ENST00000412827 ZNF790Q6PG37 636 aa19.44■□□□□ 0.7
PUDP-202ENST00000412827 ALDH1L2Q3SY69 923 aa19.44■□□□□ 0.7
PUDP-202ENST00000412827 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.7
PUDP-202ENST00000412827 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
PUDP-202ENST00000412827 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
PUDP-202ENST00000412827 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
PUDP-202ENST00000412827 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
PUDP-202ENST00000412827 KDM3BQ7LBC6 1761 aa19.43■□□□□ 0.7
PUDP-202ENST00000412827 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
PUDP-202ENST00000412827 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
PUDP-202ENST00000412827 ASAP1Q9ULH1 1129 aa19.43■□□□□ 0.7
PUDP-202ENST00000412827 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
PUDP-202ENST00000412827 SLC27A3Q5K4L6 730 aa19.42■□□□□ 0.7
PUDP-202ENST00000412827 PTF1AQ7RTS3 328 aa19.42■□□□□ 0.7
PUDP-202ENST00000412827 MBIPQ9NS73 344 aa19.42■□□□□ 0.7
PUDP-202ENST00000412827 UBR2Q8IWV8 1755 aa19.42■□□□□ 0.7
PUDP-202ENST00000412827 MS4A1P11836 297 aa19.41■□□□□ 0.7
PUDP-202ENST00000412827 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
PUDP-202ENST00000412827 KCPQ6ZWJ8 1503 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 LY75O60449 1722 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 EP400Q96L91 3159 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 SLC39A6Q13433 755 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
PUDP-202ENST00000412827 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
PUDP-202ENST00000412827 ZNF831Q5JPB2 1677 aa19.4■□□□□ 0.7
PUDP-202ENST00000412827 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.69
PUDP-202ENST00000412827 SIK1P57059 783 aa19.39■□□□□ 0.69
PUDP-202ENST00000412827 CICQ96RK0 1608 aaPredicted RBP19.39■□□□□ 0.69
PUDP-202ENST00000412827 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
PUDP-202ENST00000412827 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
PUDP-202ENST00000412827 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
PUDP-202ENST00000412827 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
PUDP-202ENST00000412827 TXNRD1Q16881 649 aa19.37■□□□□ 0.69
PUDP-202ENST00000412827 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
PUDP-202ENST00000412827 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
PUDP-202ENST00000412827 VAMP4O75379 141 aa19.36■□□□□ 0.69
PUDP-202ENST00000412827 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
PUDP-202ENST00000412827 EN1Q05925 392 aaPredicted RBP19.36■□□□□ 0.69
PUDP-202ENST00000412827 AAMPQ13685 434 aa19.36■□□□□ 0.69
PUDP-202ENST00000412827 KIF16BQ96L93 1317 aa19.35■□□□□ 0.69
PUDP-202ENST00000412827 BCAR3O75815 825 aa19.35■□□□□ 0.69
PUDP-202ENST00000412827 SNRPA1P09661 255 aaKnown RBP19.35■□□□□ 0.69
PUDP-202ENST00000412827 EIF4A1P60842 406 aaKnown RBP19.35■□□□□ 0.69
PUDP-202ENST00000412827 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
PUDP-202ENST00000412827 CAMKK2Q96RR4 588 aa19.35■□□□□ 0.69
PUDP-202ENST00000412827 RREB1Q92766 1687 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms