RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 CAMTA1Q9Y6Y1 1673 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 NFAT5O94916 1531 aa12.34□□□□□ -0.43
SMPD4-203ENST00000412570 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
SMPD4-203ENST00000412570 KCNQ2O43526 872 aa12.34□□□□□ -0.43
SMPD4-203ENST00000412570 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
SMPD4-203ENST00000412570 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
SMPD4-203ENST00000412570 DDB1Q16531 1140 aa12.33□□□□□ -0.44
SMPD4-203ENST00000412570 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
SMPD4-203ENST00000412570 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-203ENST00000412570 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
SMPD4-203ENST00000412570 A1BGP04217 495 aa12.32□□□□□ -0.44
SMPD4-203ENST00000412570 KDRP35968 1356 aa12.32□□□□□ -0.44
SMPD4-203ENST00000412570 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
SMPD4-203ENST00000412570 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
SMPD4-203ENST00000412570 RTL1A6NKG5 1358 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
SMPD4-203ENST00000412570 FLIIQ13045 1269 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
SMPD4-203ENST00000412570 MVPQ14764 893 aaKnown RBP12.3□□□□□ -0.44
SMPD4-203ENST00000412570 MEIS3Q99687 375 aa12.3□□□□□ -0.44
SMPD4-203ENST00000412570 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
SMPD4-203ENST00000412570 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
SMPD4-203ENST00000412570 UTRNP46939 3433 aa12.3□□□□□ -0.44
SMPD4-203ENST00000412570 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
SMPD4-203ENST00000412570 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
SMPD4-203ENST00000412570 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
SMPD4-203ENST00000412570 IL16Q14005 1332 aa12.29□□□□□ -0.44
SMPD4-203ENST00000412570 CRB1P82279 1406 aa12.29□□□□□ -0.44
SMPD4-203ENST00000412570 KIF16BQ96L93 1317 aa12.29□□□□□ -0.44
SMPD4-203ENST00000412570 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
SMPD4-203ENST00000412570 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 LNPKQ9C0E8 428 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 AFF2P51816 1311 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 PIGBQ92521 554 aa12.28□□□□□ -0.44
SMPD4-203ENST00000412570 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-203ENST00000412570 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.44
SMPD4-203ENST00000412570 COPS6Q7L5N1 327 aa12.27□□□□□ -0.44
SMPD4-203ENST00000412570 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.44
SMPD4-203ENST00000412570 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
SMPD4-203ENST00000412570 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
SMPD4-203ENST00000412570 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
SMPD4-203ENST00000412570 TRPM3Q9HCF6 1732 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-203ENST00000412570 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
SMPD4-203ENST00000412570 SMARCA5O60264 1052 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-203ENST00000412570 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-203ENST00000412570 GPTP24298 496 aa12.26□□□□□ -0.45
SMPD4-203ENST00000412570 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
SMPD4-203ENST00000412570 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
SMPD4-203ENST00000412570 ANKRD45Q5TZF3 282 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-203ENST00000412570 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
SMPD4-203ENST00000412570 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 TSHZ3Q63HK5 1081 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
SMPD4-203ENST00000412570 MYD88Q99836 296 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-203ENST00000412570 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 API5Q9BZZ5 524 aaKnown RBP12.24□□□□□ -0.45
SMPD4-203ENST00000412570 EXOC6BQ9Y2D4 811 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 KDM6AO15550 1401 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-203ENST00000412570 PHF14O94880 888 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 SIL1Q9H173 461 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 SLIT3O75094 1523 aa12.24□□□□□ -0.45
SMPD4-203ENST00000412570 KIF24Q5T7B8 1368 aa12.23□□□□□ -0.45
SMPD4-203ENST00000412570 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
SMPD4-203ENST00000412570 CPDO75976 1380 aa12.23□□□□□ -0.45
SMPD4-203ENST00000412570 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
SMPD4-203ENST00000412570 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-203ENST00000412570 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-203ENST00000412570 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 PHLPP1O60346 1717 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 MSH5O43196 834 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
SMPD4-203ENST00000412570 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
SMPD4-203ENST00000412570 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
SMPD4-203ENST00000412570 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-203ENST00000412570 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-203ENST00000412570 JCADQ9P266 1359 aa12.21□□□□□ -0.45
SMPD4-203ENST00000412570 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.46
SMPD4-203ENST00000412570 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-203ENST00000412570 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
SMPD4-203ENST00000412570 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms