RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 ATP6V1AP38606 617 aa27.15■■□□□ 1.94
LSM12P1-201ENST00000411836 SLC52A2Q9HAB3 445 aa27.15■■□□□ 1.94
LSM12P1-201ENST00000411836 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
LSM12P1-201ENST00000411836 SPON1Q9HCB6 807 aa27.13■■□□□ 1.93
LSM12P1-201ENST00000411836 TEFQ10587 303 aa27.12■■□□□ 1.93
LSM12P1-201ENST00000411836 RTF1Q92541 710 aaKnown RBP27.12■■□□□ 1.93
LSM12P1-201ENST00000411836 PDGFDQ9GZP0 370 aaPredicted RBP27.12■■□□□ 1.93
LSM12P1-201ENST00000411836 ZBTB7AO95365 584 aa27.11■■□□□ 1.93
LSM12P1-201ENST00000411836 AK7Q96M32 723 aa27.11■■□□□ 1.93
LSM12P1-201ENST00000411836 MAPK8IP3Q9UPT6 1336 aa27.11■■□□□ 1.93
LSM12P1-201ENST00000411836 SCN11AQ9UI33 1791 aa27.1■■□□□ 1.93
LSM12P1-201ENST00000411836 MSH5O43196 834 aa27.1■■□□□ 1.93
LSM12P1-201ENST00000411836 PTCD1O75127 700 aaKnown RBP27.1■■□□□ 1.93
LSM12P1-201ENST00000411836 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
LSM12P1-201ENST00000411836 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
LSM12P1-201ENST00000411836 ATF5Q9Y2D1 282 aaPredicted RBP27.07■■□□□ 1.92
LSM12P1-201ENST00000411836 C5P01031 1676 aa27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 ANP32CO43423 234 aa27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 ITPK1Q13572 414 aa27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 LINC00116Q8NCU8 138 aa27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 PPP1R1BQ9UD71 204 aaPredicted RBP27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 PNPLA7Q6ZV29 1317 aa27.06■■□□□ 1.92
LSM12P1-201ENST00000411836 SLC39A6Q13433 755 aa27.05■■□□□ 1.92
LSM12P1-201ENST00000411836 MTFR1LQ9H019 292 aa27.05■■□□□ 1.92
LSM12P1-201ENST00000411836 LRP5O75197 1615 aa27.05■■□□□ 1.92
LSM12P1-201ENST00000411836 TTC5Q8N0Z6 440 aa27.04■■□□□ 1.92
LSM12P1-201ENST00000411836 FLAD1Q8NFF5 587 aa27.04■■□□□ 1.92
LSM12P1-201ENST00000411836 PLEKHF1Q96S99 279 aa27.04■■□□□ 1.92
LSM12P1-201ENST00000411836 MRC1P22897 1456 aa27.03■■□□□ 1.92
LSM12P1-201ENST00000411836 CASZ1Q86V15 1759 aa27.02■■□□□ 1.92
LSM12P1-201ENST00000411836 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
LSM12P1-201ENST00000411836 MCM10Q7L590 875 aa27.02■■□□□ 1.92
LSM12P1-201ENST00000411836 SLC16A10Q8TF71 515 aa27.02■■□□□ 1.92
LSM12P1-201ENST00000411836 SLC4A9Q96Q91 983 aa27.02■■□□□ 1.92
LSM12P1-201ENST00000411836 GNPATO15228 680 aa27.01■■□□□ 1.91
LSM12P1-201ENST00000411836 PHF14O94880 888 aa27.01■■□□□ 1.91
LSM12P1-201ENST00000411836 NFE2L2Q16236 605 aa27.01■■□□□ 1.91
LSM12P1-201ENST00000411836 C4BP0C0L5 1744 aa27.01■■□□□ 1.91
LSM12P1-201ENST00000411836 COL23A1Q86Y22 540 aaPredicted RBP27■■□□□ 1.91
LSM12P1-201ENST00000411836 ADAMTS7Q9UKP4 1686 aa27■■□□□ 1.91
LSM12P1-201ENST00000411836 TAF1LQ8IZX4 1826 aa27■■□□□ 1.91
LSM12P1-201ENST00000411836 BTBD11A6QL63 1104 aa26.99■■□□□ 1.91
LSM12P1-201ENST00000411836 DCTN1Q14203 1278 aa26.99■■□□□ 1.91
LSM12P1-201ENST00000411836 CEMIPQ8WUJ3 1361 aa26.98■■□□□ 1.91
LSM12P1-201ENST00000411836 VIRMAQ69YN4 1812 aaKnown RBP26.98■■□□□ 1.91
LSM12P1-201ENST00000411836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.97■■□□□ 1.91
LSM12P1-201ENST00000411836 CCDC146Q8IYE0 955 aa26.97■■□□□ 1.91
LSM12P1-201ENST00000411836 SSFA2P28290 1259 aa26.96■■□□□ 1.91
LSM12P1-201ENST00000411836 ADAMTS8Q9UP79 889 aa26.96■■□□□ 1.91
LSM12P1-201ENST00000411836 RTCBQ9Y3I0 505 aaKnown RBP26.96■■□□□ 1.91
LSM12P1-201ENST00000411836 QSER1Q2KHR3 1735 aa26.96■■□□□ 1.91
LSM12P1-201ENST00000411836 POLD1P28340 1107 aa26.95■■□□□ 1.9
LSM12P1-201ENST00000411836 RC3H1Q5TC82 1133 aaKnown RBP26.95■■□□□ 1.9
LSM12P1-201ENST00000411836 ZNF790Q6PG37 636 aa26.95■■□□□ 1.9
LSM12P1-201ENST00000411836 CNTNAP4Q9C0A0 1308 aa26.94■■□□□ 1.9
LSM12P1-201ENST00000411836 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
LSM12P1-201ENST00000411836 DNAJC10Q8IXB1 793 aa26.94■■□□□ 1.9
LSM12P1-201ENST00000411836 TUBGCP6Q96RT7 1819 aa26.93■■□□□ 1.9
LSM12P1-201ENST00000411836 SRCAPQ6ZRS2 3230 aa26.93■■□□□ 1.9
LSM12P1-201ENST00000411836 PTGER2P43116 358 aa26.93■■□□□ 1.9
LSM12P1-201ENST00000411836 RIPK4P57078 832 aa26.93■■□□□ 1.9
LSM12P1-201ENST00000411836 RUNDC1Q96C34 613 aa26.93■■□□□ 1.9
LSM12P1-201ENST00000411836 ZNF831Q5JPB2 1677 aa26.92■■□□□ 1.9
LSM12P1-201ENST00000411836 CRKLP46109 303 aaKnown RBP26.92■■□□□ 1.9
LSM12P1-201ENST00000411836 TRAPPC3LQ5T215 181 aa26.92■■□□□ 1.9
LSM12P1-201ENST00000411836 VSIG10Q8N0Z9 540 aa26.92■■□□□ 1.9
LSM12P1-201ENST00000411836 TAF7Q15545 349 aaPredicted RBP26.91■■□□□ 1.9
LSM12P1-201ENST00000411836 AMIGO3Q86WK7 504 aa26.91■■□□□ 1.9
LSM12P1-201ENST00000411836 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
LSM12P1-201ENST00000411836 RPS6KA4O75676 772 aa26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 TMPOP42166 694 aaKnown RBP26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 LMOD3Q0VAK6 560 aa26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 NEUROD2Q15784 382 aa26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 MSL1Q68DK7 614 aa26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 ZNF496Q96IT1 587 aaPredicted RBP26.9■■□□□ 1.9
LSM12P1-201ENST00000411836 ARXQ96QS3 562 aa26.89■■□□□ 1.9
LSM12P1-201ENST00000411836 RRP7AQ9Y3A4 280 aaKnown RBP26.89■■□□□ 1.9
LSM12P1-201ENST00000411836 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.89
LSM12P1-201ENST00000411836 STARD3NLO95772 234 aa26.88■■□□□ 1.89
LSM12P1-201ENST00000411836 TEX13AQ9BXU3 409 aaPredicted RBP26.88■■□□□ 1.89
LSM12P1-201ENST00000411836 MRS2Q9HD23 443 aa26.88■■□□□ 1.89
LSM12P1-201ENST00000411836 CCDC87Q9NVE4 849 aa26.88■■□□□ 1.89
LSM12P1-201ENST00000411836 KCNQ3O43525 872 aa26.87■■□□□ 1.89
LSM12P1-201ENST00000411836 ADRA2BP18089 450 aa26.87■■□□□ 1.89
LSM12P1-201ENST00000411836 RFC4P35249 363 aa26.87■■□□□ 1.89
LSM12P1-201ENST00000411836 PNISRQ8TF01 805 aaKnown RBP26.87■■□□□ 1.89
LSM12P1-201ENST00000411836 THUMPD2Q9BTF0 503 aaKnown RBP26.87■■□□□ 1.89
LSM12P1-201ENST00000411836 HEG1Q9ULI3 1381 aa26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 CYP19A1P11511 503 aaPredicted RBP26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 UBR3Q6ZT12 1888 aa26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 SGIP1Q9BQI5 828 aa26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 SIPA1L3O60292 1781 aaPredicted RBP26.86■■□□□ 1.89
LSM12P1-201ENST00000411836 COL5A3P25940 1745 aaPredicted RBP26.85■■□□□ 1.89
LSM12P1-201ENST00000411836 ARHGEF1Q92888 912 aaKnown RBP26.85■■□□□ 1.89
LSM12P1-201ENST00000411836 MIS18AQ9NYP9 233 aa26.85■■□□□ 1.89
LSM12P1-201ENST00000411836 TJP1Q07157 1748 aa26.85■■□□□ 1.89
LSM12P1-201ENST00000411836 INTS5Q6P9B9 1019 aaKnown RBP26.84■■□□□ 1.89
LSM12P1-201ENST00000411836 KLHL34Q8N239 644 aa26.84■■□□□ 1.89
LSM12P1-201ENST00000411836 DLG5Q8TDM6 1919 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms