RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
NOD1-202ENST00000411552 LOC102724428A0A0B4J2F2 783 aa21.74■■□□□ 1.07
NOD1-202ENST00000411552 GNAT3A8MTJ3 354 aa21.74■■□□□ 1.07
NOD1-202ENST00000411552 SIK1P57059 783 aa21.74■■□□□ 1.07
NOD1-202ENST00000411552 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
NOD1-202ENST00000411552 SLC52A2Q9HAB3 445 aa21.74■■□□□ 1.07
NOD1-202ENST00000411552 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
NOD1-202ENST00000411552 LRP5O75197 1615 aa21.73■■□□□ 1.07
NOD1-202ENST00000411552 IL17REQ8NFR9 667 aa21.71■■□□□ 1.07
NOD1-202ENST00000411552 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
NOD1-202ENST00000411552 QSER1Q2KHR3 1735 aa21.71■■□□□ 1.07
NOD1-202ENST00000411552 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
NOD1-202ENST00000411552 TFCP2L1Q9NZI6 479 aa21.7■■□□□ 1.06
NOD1-202ENST00000411552 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
NOD1-202ENST00000411552 ITPK1Q13572 414 aa21.69■■□□□ 1.06
NOD1-202ENST00000411552 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
NOD1-202ENST00000411552 RBM42Q9BTD8 480 aaKnown RBP21.69■■□□□ 1.06
NOD1-202ENST00000411552 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
NOD1-202ENST00000411552 NEFMP07197 916 aa21.68■■□□□ 1.06
NOD1-202ENST00000411552 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
NOD1-202ENST00000411552 LINC00116Q8NCU8 138 aa21.68■■□□□ 1.06
NOD1-202ENST00000411552 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
NOD1-202ENST00000411552 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
NOD1-202ENST00000411552 DLG5Q8TDM6 1919 aa21.67■■□□□ 1.06
NOD1-202ENST00000411552 PNPLA7Q6ZV29 1317 aa21.67■■□□□ 1.06
NOD1-202ENST00000411552 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
NOD1-202ENST00000411552 PNNQ9H307 717 aaKnown RBP21.67■■□□□ 1.06
NOD1-202ENST00000411552 MAPK8IP3Q9UPT6 1336 aa21.65■■□□□ 1.06
NOD1-202ENST00000411552 ZBTB7AO95365 584 aa21.65■■□□□ 1.06
NOD1-202ENST00000411552 TEFQ10587 303 aa21.65■■□□□ 1.06
NOD1-202ENST00000411552 SLC39A6Q13433 755 aa21.65■■□□□ 1.06
NOD1-202ENST00000411552 COL5A3P25940 1745 aaPredicted RBP21.64■■□□□ 1.06
NOD1-202ENST00000411552 WDR43Q15061 677 aaKnown RBP eCLIP21.64■■□□□ 1.05
NOD1-202ENST00000411552 MCM10Q7L590 875 aa21.64■■□□□ 1.05
NOD1-202ENST00000411552 RTF1Q92541 710 aaKnown RBP21.64■■□□□ 1.05
NOD1-202ENST00000411552 SPON1Q9HCB6 807 aa21.64■■□□□ 1.05
NOD1-202ENST00000411552 UBR3Q6ZT12 1888 aa21.64■■□□□ 1.05
NOD1-202ENST00000411552 ANP32CO43423 234 aa21.63■■□□□ 1.05
NOD1-202ENST00000411552 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
NOD1-202ENST00000411552 AK7Q96M32 723 aa21.63■■□□□ 1.05
NOD1-202ENST00000411552 KCPQ6ZWJ8 1503 aa21.63■■□□□ 1.05
NOD1-202ENST00000411552 UBR2Q8IWV8 1755 aa21.62■■□□□ 1.05
NOD1-202ENST00000411552 HTATSF1O43719 755 aaKnown RBP21.62■■□□□ 1.05
NOD1-202ENST00000411552 DCTN1Q14203 1278 aa21.62■■□□□ 1.05
NOD1-202ENST00000411552 ADAMTS8Q9UP79 889 aa21.62■■□□□ 1.05
NOD1-202ENST00000411552 TJP1Q07157 1748 aa21.62■■□□□ 1.05
NOD1-202ENST00000411552 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
NOD1-202ENST00000411552 AMIGO3Q86WK7 504 aa21.61■■□□□ 1.05
NOD1-202ENST00000411552 MTFR1LQ9H019 292 aa21.61■■□□□ 1.05
NOD1-202ENST00000411552 ATF5Q9Y2D1 282 aaPredicted RBP21.61■■□□□ 1.05
NOD1-202ENST00000411552 CCDC184Q52MB2 194 aa21.6■■□□□ 1.05
NOD1-202ENST00000411552 COL23A1Q86Y22 540 aaPredicted RBP21.6■■□□□ 1.05
NOD1-202ENST00000411552 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
NOD1-202ENST00000411552 MYH14Q7Z406 1995 aaKnown RBP21.59■■□□□ 1.05
NOD1-202ENST00000411552 SMIM5Q71RC9 77 aa21.59■■□□□ 1.05
NOD1-202ENST00000411552 GNPATO15228 680 aa21.58■■□□□ 1.05
NOD1-202ENST00000411552 PTGER2P43116 358 aa21.58■■□□□ 1.05
NOD1-202ENST00000411552 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
NOD1-202ENST00000411552 TTC5Q8N0Z6 440 aa21.58■■□□□ 1.05
NOD1-202ENST00000411552 SLC16A10Q8TF71 515 aa21.58■■□□□ 1.05
NOD1-202ENST00000411552 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
NOD1-202ENST00000411552 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
NOD1-202ENST00000411552 MSH5O43196 834 aa21.57■■□□□ 1.04
NOD1-202ENST00000411552 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
NOD1-202ENST00000411552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.56■■□□□ 1.04
NOD1-202ENST00000411552 PHF14O94880 888 aa21.56■■□□□ 1.04
NOD1-202ENST00000411552 SSFA2P28290 1259 aa21.56■■□□□ 1.04
NOD1-202ENST00000411552 TMPOP42166 694 aaKnown RBP21.56■■□□□ 1.04
NOD1-202ENST00000411552 RC3H1Q5TC82 1133 aaKnown RBP21.56■■□□□ 1.04
NOD1-202ENST00000411552 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
NOD1-202ENST00000411552 RUNDC1Q96C34 613 aa21.56■■□□□ 1.04
NOD1-202ENST00000411552 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
NOD1-202ENST00000411552 RIPK4P57078 832 aa21.55■■□□□ 1.04
NOD1-202ENST00000411552 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
NOD1-202ENST00000411552 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
NOD1-202ENST00000411552 KCNQ3O43525 872 aa21.54■■□□□ 1.04
NOD1-202ENST00000411552 VSIG10Q8N0Z9 540 aa21.54■■□□□ 1.04
NOD1-202ENST00000411552 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
NOD1-202ENST00000411552 THUMPD2Q9BTF0 503 aaKnown RBP21.54■■□□□ 1.04
NOD1-202ENST00000411552 RRP7AQ9Y3A4 280 aaKnown RBP21.54■■□□□ 1.04
NOD1-202ENST00000411552 TAF7Q15545 349 aaPredicted RBP21.53■■□□□ 1.04
NOD1-202ENST00000411552 PPP1R1BQ9UD71 204 aaPredicted RBP21.53■■□□□ 1.04
NOD1-202ENST00000411552 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
NOD1-202ENST00000411552 HEG1Q9ULI3 1381 aa21.52■■□□□ 1.04
NOD1-202ENST00000411552 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
NOD1-202ENST00000411552 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
NOD1-202ENST00000411552 CYP19A1P11511 503 aaPredicted RBP21.51■■□□□ 1.03
NOD1-202ENST00000411552 INTS5Q6P9B9 1019 aaKnown RBP21.51■■□□□ 1.03
NOD1-202ENST00000411552 FMNL2Q96PY5 1086 aa21.51■■□□□ 1.03
NOD1-202ENST00000411552 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
NOD1-202ENST00000411552 MSL1Q68DK7 614 aa21.5■■□□□ 1.03
NOD1-202ENST00000411552 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
NOD1-202ENST00000411552 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
NOD1-202ENST00000411552 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
NOD1-202ENST00000411552 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
NOD1-202ENST00000411552 KDM3BQ7LBC6 1761 aa21.48■■□□□ 1.03
NOD1-202ENST00000411552 ADRA2BP18089 450 aa21.48■■□□□ 1.03
NOD1-202ENST00000411552 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
NOD1-202ENST00000411552 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
NOD1-202ENST00000411552 POLD1P28340 1107 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms