RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CCNL1Q9UK58 526 aaPredicted RBP31.61■■■□□ 2.65
UBE2E3-202ENST00000410062 ANO8Q9HCE9 1232 aaPredicted RBP31.6■■■□□ 2.65
UBE2E3-202ENST00000410062 R3HDM1Q15032 1099 aaKnown RBP31.6■■■□□ 2.65
UBE2E3-202ENST00000410062 MRC1P22897 1456 aa31.59■■■□□ 2.65
UBE2E3-202ENST00000410062 MRS2Q9HD23 443 aa31.59■■■□□ 2.65
UBE2E3-202ENST00000410062 DLG5Q8TDM6 1919 aa31.58■■■□□ 2.65
UBE2E3-202ENST00000410062 NFE2L2Q16236 605 aa31.57■■■□□ 2.64
UBE2E3-202ENST00000410062 MCM10Q7L590 875 aa31.56■■■□□ 2.64
UBE2E3-202ENST00000410062 RTF1Q92541 710 aaKnown RBP31.56■■■□□ 2.64
UBE2E3-202ENST00000410062 PAPPAQ13219 1627 aa31.56■■■□□ 2.64
UBE2E3-202ENST00000410062 DCTN1Q14203 1278 aa31.56■■■□□ 2.64
UBE2E3-202ENST00000410062 CEMIPQ8WUJ3 1361 aa31.54■■■□□ 2.64
UBE2E3-202ENST00000410062 LOC102724428A0A0B4J2F2 783 aa31.54■■■□□ 2.64
UBE2E3-202ENST00000410062 SIK1P57059 783 aa31.54■■■□□ 2.64
UBE2E3-202ENST00000410062 TEFQ10587 303 aa31.54■■■□□ 2.64
UBE2E3-202ENST00000410062 RUNDC1Q96C34 613 aa31.53■■■□□ 2.64
UBE2E3-202ENST00000410062 STK32BQ9NY57 414 aa31.53■■■□□ 2.64
UBE2E3-202ENST00000410062 HTATSF1O43719 755 aaKnown RBP31.51■■■□□ 2.64
UBE2E3-202ENST00000410062 RBM42Q9BTD8 480 aaKnown RBP31.51■■■□□ 2.64
UBE2E3-202ENST00000410062 SLC39A6Q13433 755 aa31.51■■■□□ 2.63
UBE2E3-202ENST00000410062 SLC15A2Q16348 729 aa31.51■■■□□ 2.63
UBE2E3-202ENST00000410062 ZNF827Q17R98 1081 aa31.51■■■□□ 2.63
UBE2E3-202ENST00000410062 PNISRQ8TF01 805 aaKnown RBP31.51■■■□□ 2.63
UBE2E3-202ENST00000410062 SIPA1L3O60292 1781 aaPredicted RBP31.5■■■□□ 2.63
UBE2E3-202ENST00000410062 C5P01031 1676 aa31.49■■■□□ 2.63
UBE2E3-202ENST00000410062 PTCD1O75127 700 aaKnown RBP31.49■■■□□ 2.63
UBE2E3-202ENST00000410062 TMPOP42166 694 aaKnown RBP31.49■■■□□ 2.63
UBE2E3-202ENST00000410062 RRP7AQ9Y3A4 280 aaKnown RBP31.49■■■□□ 2.63
UBE2E3-202ENST00000410062 TAF1LQ8IZX4 1826 aa31.48■■■□□ 2.63
UBE2E3-202ENST00000410062 ATP6V1AP38606 617 aa31.48■■■□□ 2.63
UBE2E3-202ENST00000410062 RIPK4P57078 832 aa31.48■■■□□ 2.63
UBE2E3-202ENST00000410062 SLC4A9Q96Q91 983 aa31.48■■■□□ 2.63
UBE2E3-202ENST00000410062 AKT1S1Q96B36 256 aa31.47■■■□□ 2.63
UBE2E3-202ENST00000410062 ITPK1Q13572 414 aa31.47■■■□□ 2.63
UBE2E3-202ENST00000410062 NEUROD2Q15784 382 aa31.46■■■□□ 2.63
UBE2E3-202ENST00000410062 THUMPD2Q9BTF0 503 aaKnown RBP31.45■■■□□ 2.63
UBE2E3-202ENST00000410062 DIEXFQ68CQ4 756 aaKnown RBP31.43■■■□□ 2.62
UBE2E3-202ENST00000410062 LINC00116Q8NCU8 138 aa31.43■■■□□ 2.62
UBE2E3-202ENST00000410062 BTBD11A6QL63 1104 aa31.42■■■□□ 2.62
UBE2E3-202ENST00000410062 PDGFDQ9GZP0 370 aaPredicted RBP31.42■■■□□ 2.62
UBE2E3-202ENST00000410062 SRCAPQ6ZRS2 3230 aa31.42■■■□□ 2.62
UBE2E3-202ENST00000410062 C4BP0C0L5 1744 aa31.41■■■□□ 2.62
UBE2E3-202ENST00000410062 KCPQ6ZWJ8 1503 aa31.41■■■□□ 2.62
UBE2E3-202ENST00000410062 TTC5Q8N0Z6 440 aa31.41■■■□□ 2.62
UBE2E3-202ENST00000410062 TFCP2L1Q9NZI6 479 aa31.41■■■□□ 2.62
UBE2E3-202ENST00000410062 ZNF831Q5JPB2 1677 aa31.41■■■□□ 2.62
UBE2E3-202ENST00000410062 APAF1O14727 1248 aa31.4■■■□□ 2.62
UBE2E3-202ENST00000410062 ZNF790Q6PG37 636 aa31.4■■■□□ 2.62
UBE2E3-202ENST00000410062 UBR2Q8IWV8 1755 aa31.39■■■□□ 2.62
UBE2E3-202ENST00000410062 TUBGCP6Q96RT7 1819 aa31.39■■■□□ 2.62
UBE2E3-202ENST00000410062 KCNQ3O43525 872 aa31.38■■■□□ 2.61
UBE2E3-202ENST00000410062 HMGB2P26583 209 aaKnown RBP31.38■■■□□ 2.61
UBE2E3-202ENST00000410062 LMOD3Q0VAK6 560 aa31.38■■■□□ 2.61
UBE2E3-202ENST00000410062 TAF7Q15545 349 aaPredicted RBP31.38■■■□□ 2.61
UBE2E3-202ENST00000410062 TJP1Q07157 1748 aa31.37■■■□□ 2.61
UBE2E3-202ENST00000410062 FAM9BQ8IZU0 186 aa31.36■■■□□ 2.61
UBE2E3-202ENST00000410062 AK7Q96M32 723 aa31.36■■■□□ 2.61
UBE2E3-202ENST00000410062 MIS18AQ9NYP9 233 aa31.36■■■□□ 2.61
UBE2E3-202ENST00000410062 TRIM35Q9UPQ4 493 aa31.36■■■□□ 2.61
UBE2E3-202ENST00000410062 CASZ1Q86V15 1759 aa31.35■■■□□ 2.61
UBE2E3-202ENST00000410062 COL5A3P25940 1745 aaPredicted RBP31.35■■■□□ 2.61
UBE2E3-202ENST00000410062 ZNF496Q96IT1 587 aaPredicted RBP31.35■■■□□ 2.61
UBE2E3-202ENST00000410062 PNPLA7Q6ZV29 1317 aa31.35■■■□□ 2.61
UBE2E3-202ENST00000410062 SENP3-EIF4A1A0A087X0R7 540 aa31.34■■■□□ 2.61
UBE2E3-202ENST00000410062 QSER1Q2KHR3 1735 aa31.34■■■□□ 2.61
UBE2E3-202ENST00000410062 DNAJC10Q8IXB1 793 aa31.33■■■□□ 2.61
UBE2E3-202ENST00000410062 SMIM5Q71RC9 77 aa31.32■■■□□ 2.6
UBE2E3-202ENST00000410062 AMIGO3Q86WK7 504 aa31.32■■■□□ 2.6
UBE2E3-202ENST00000410062 CICQ96RK0 1608 aaPredicted RBP31.32■■■□□ 2.6
UBE2E3-202ENST00000410062 VSIG10Q8N0Z9 540 aa31.3■■■□□ 2.6
UBE2E3-202ENST00000410062 FMNL2Q96PY5 1086 aa31.3■■■□□ 2.6
UBE2E3-202ENST00000410062 UBR3Q6ZT12 1888 aa31.3■■■□□ 2.6
UBE2E3-202ENST00000410062 GNPATO15228 680 aa31.3■■■□□ 2.6
UBE2E3-202ENST00000410062 HEG1Q9ULI3 1381 aa31.29■■■□□ 2.6
UBE2E3-202ENST00000410062 CNTNAP4Q9C0A0 1308 aa31.28■■■□□ 2.6
UBE2E3-202ENST00000410062 MYH14Q7Z406 1995 aaKnown RBP31.28■■■□□ 2.6
UBE2E3-202ENST00000410062 PHF14O94880 888 aa31.28■■■□□ 2.6
UBE2E3-202ENST00000410062 ZBTB7AO95365 584 aa31.28■■■□□ 2.6
UBE2E3-202ENST00000410062 COL23A1Q86Y22 540 aaPredicted RBP31.28■■■□□ 2.6
UBE2E3-202ENST00000410062 KDM3BQ7LBC6 1761 aa31.27■■■□□ 2.6
UBE2E3-202ENST00000410062 CCER2I3L3R5 266 aa31.27■■■□□ 2.6
UBE2E3-202ENST00000410062 CRKLP46109 303 aaKnown RBP31.27■■■□□ 2.6
UBE2E3-202ENST00000410062 RC3H1Q5TC82 1133 aaKnown RBP31.27■■■□□ 2.6
UBE2E3-202ENST00000410062 MSH5O43196 834 aa31.26■■■□□ 2.6
UBE2E3-202ENST00000410062 MIER1Q8N108 512 aa31.26■■■□□ 2.6
UBE2E3-202ENST00000410062 CYP19A1P11511 503 aaPredicted RBP31.26■■■□□ 2.59
UBE2E3-202ENST00000410062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.25■■■□□ 2.59
UBE2E3-202ENST00000410062 TSPYL4Q9UJ04 414 aa31.24■■■□□ 2.59
UBE2E3-202ENST00000410062 INTS5Q6P9B9 1019 aaKnown RBP31.23■■■□□ 2.59
UBE2E3-202ENST00000410062 RTCBQ9Y3I0 505 aaKnown RBP31.23■■■□□ 2.59
UBE2E3-202ENST00000410062 SSFA2P28290 1259 aa31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 FLAD1Q8NFF5 587 aa31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 ATF5Q9Y2D1 282 aaPredicted RBP31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 LAS1LQ9Y4W2 734 aaKnown RBP31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 PRAMEF22A3QJZ6 481 aa31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 CCDC87Q9NVE4 849 aa31.22■■■□□ 2.59
UBE2E3-202ENST00000410062 RPS6KA4O75676 772 aa31.21■■■□□ 2.59
UBE2E3-202ENST00000410062 STARD3NLO95772 234 aa31.2■■■□□ 2.58
UBE2E3-202ENST00000410062 TEX13AQ9BXU3 409 aaPredicted RBP31.2■■■□□ 2.58
UBE2E3-202ENST00000410062 MTFR1LQ9H019 292 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms