RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 RTF1Q92541 710 aaKnown RBP14.45□□□□□ -0.1
CHMP3-205ENST00000409810 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-205ENST00000409810 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
CHMP3-205ENST00000409810 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-205ENST00000409810 LOC102724428A0A0B4J2F2 783 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 SIK1P57059 783 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 PLEKHF1Q96S99 279 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 LGR6Q9HBX8 967 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 ATG3Q9NT62 314 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 ASAP1Q9ULH1 1129 aa14.44□□□□□ -0.1
CHMP3-205ENST00000409810 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
CHMP3-205ENST00000409810 HTATSF1O43719 755 aaKnown RBP14.43□□□□□ -0.1
CHMP3-205ENST00000409810 TEFQ10587 303 aa14.43□□□□□ -0.1
CHMP3-205ENST00000409810 C4BP0C0L5 1744 aa14.43□□□□□ -0.1
CHMP3-205ENST00000409810 CASZ1Q86V15 1759 aa14.42□□□□□ -0.1
CHMP3-205ENST00000409810 ATP6V1AP38606 617 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 KCNQ4P56696 695 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 CEMIPQ8WUJ3 1361 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 UBR2Q8IWV8 1755 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 COL5A3P25940 1745 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-205ENST00000409810 LRP5O75197 1615 aa14.41□□□□□ -0.1
CHMP3-205ENST00000409810 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-205ENST00000409810 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
CHMP3-205ENST00000409810 TTC5Q8N0Z6 440 aa14.4□□□□□ -0.1
CHMP3-205ENST00000409810 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
CHMP3-205ENST00000409810 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
CHMP3-205ENST00000409810 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
CHMP3-205ENST00000409810 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
CHMP3-205ENST00000409810 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
CHMP3-205ENST00000409810 AK7Q96M32 723 aa14.39□□□□□ -0.11
CHMP3-205ENST00000409810 TFCP2L1Q9NZI6 479 aa14.39□□□□□ -0.11
CHMP3-205ENST00000409810 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
CHMP3-205ENST00000409810 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
CHMP3-205ENST00000409810 ADAMTS8Q9UP79 889 aa14.38□□□□□ -0.11
CHMP3-205ENST00000409810 TJP1Q07157 1748 aa14.38□□□□□ -0.11
CHMP3-205ENST00000409810 PTCD1O75127 700 aaKnown RBP14.37□□□□□ -0.11
CHMP3-205ENST00000409810 MCM10Q7L590 875 aa14.37□□□□□ -0.11
CHMP3-205ENST00000409810 CCDC146Q8IYE0 955 aa14.37□□□□□ -0.11
CHMP3-205ENST00000409810 KCPQ6ZWJ8 1503 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 SLC39A6Q13433 755 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 ITPK1Q13572 414 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 LINC00116Q8NCU8 138 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 FLAD1Q8NFF5 587 aa14.36□□□□□ -0.11
CHMP3-205ENST00000409810 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
CHMP3-205ENST00000409810 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
CHMP3-205ENST00000409810 RIPK4P57078 832 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 SPON1Q9HCB6 807 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
CHMP3-205ENST00000409810 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
CHMP3-205ENST00000409810 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
CHMP3-205ENST00000409810 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
CHMP3-205ENST00000409810 SLC16A10Q8TF71 515 aa14.34□□□□□ -0.11
CHMP3-205ENST00000409810 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
CHMP3-205ENST00000409810 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
CHMP3-205ENST00000409810 GNPATO15228 680 aa14.33□□□□□ -0.12
CHMP3-205ENST00000409810 SSFA2P28290 1259 aa14.33□□□□□ -0.12
CHMP3-205ENST00000409810 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-205ENST00000409810 CCDC184Q52MB2 194 aa14.33□□□□□ -0.12
CHMP3-205ENST00000409810 RC3H1Q5TC82 1133 aaKnown RBP14.33□□□□□ -0.12
CHMP3-205ENST00000409810 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
CHMP3-205ENST00000409810 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
CHMP3-205ENST00000409810 MSH5O43196 834 aa14.32□□□□□ -0.12
CHMP3-205ENST00000409810 NEUROD2Q15784 382 aa14.32□□□□□ -0.12
CHMP3-205ENST00000409810 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
CHMP3-205ENST00000409810 RTCBQ9Y3I0 505 aaKnown RBP14.32□□□□□ -0.12
CHMP3-205ENST00000409810 HEG1Q9ULI3 1381 aa14.32□□□□□ -0.12
CHMP3-205ENST00000409810 ZBTB7AO95365 584 aa14.31□□□□□ -0.12
CHMP3-205ENST00000409810 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-205ENST00000409810 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
CHMP3-205ENST00000409810 COL24A1Q17RW2 1714 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 LAMB4A4D0S4 1761 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
CHMP3-205ENST00000409810 PHF14O94880 888 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 STARD3NLO95772 234 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 ADRA2BP18089 450 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 CRKLP46109 303 aaKnown RBP14.3□□□□□ -0.12
CHMP3-205ENST00000409810 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-205ENST00000409810 DNAJC10Q8IXB1 793 aa14.3□□□□□ -0.12
CHMP3-205ENST00000409810 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-205ENST00000409810 APAF1O14727 1248 aa14.29□□□□□ -0.12
CHMP3-205ENST00000409810 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
CHMP3-205ENST00000409810 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
CHMP3-205ENST00000409810 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-205ENST00000409810 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
CHMP3-205ENST00000409810 RPS6KA4O75676 772 aa14.28□□□□□ -0.12
CHMP3-205ENST00000409810 POLD1P28340 1107 aa14.28□□□□□ -0.12
CHMP3-205ENST00000409810 TRAPPC3LQ5T215 181 aa14.28□□□□□ -0.12
CHMP3-205ENST00000409810 CCDC87Q9NVE4 849 aa14.28□□□□□ -0.12
CHMP3-205ENST00000409810 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-205ENST00000409810 KCNQ3O43525 872 aa14.27□□□□□ -0.13
CHMP3-205ENST00000409810 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.13
CHMP3-205ENST00000409810 CYP19A1P11511 503 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-205ENST00000409810 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms