RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 KDM6AO15550 1401 aaPredicted RBP22.81■■□□□ 1.24
PDE6D-202ENST00000409772 ZBTB7AO95365 584 aa22.8■■□□□ 1.24
PDE6D-202ENST00000409772 RSPH6AQ9H0K4 717 aa22.8■■□□□ 1.24
PDE6D-202ENST00000409772 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
PDE6D-202ENST00000409772 PDGFDQ9GZP0 370 aaPredicted RBP22.79■■□□□ 1.24
PDE6D-202ENST00000409772 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
PDE6D-202ENST00000409772 AK7Q96M32 723 aa22.78■■□□□ 1.24
PDE6D-202ENST00000409772 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
PDE6D-202ENST00000409772 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
PDE6D-202ENST00000409772 PNPLA7Q6ZV29 1317 aa22.77■■□□□ 1.24
PDE6D-202ENST00000409772 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
PDE6D-202ENST00000409772 CASZ1Q86V15 1759 aa22.76■■□□□ 1.23
PDE6D-202ENST00000409772 MSH5O43196 834 aa22.75■■□□□ 1.23
PDE6D-202ENST00000409772 TEFQ10587 303 aa22.75■■□□□ 1.23
PDE6D-202ENST00000409772 PHACTR3Q96KR7 559 aa22.75■■□□□ 1.23
PDE6D-202ENST00000409772 MAP3K5Q99683 1374 aa22.75■■□□□ 1.23
PDE6D-202ENST00000409772 ZNF316A6NFI3 1004 aaPredicted RBP22.74■■□□□ 1.23
PDE6D-202ENST00000409772 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
PDE6D-202ENST00000409772 QSER1Q2KHR3 1735 aa22.74■■□□□ 1.23
PDE6D-202ENST00000409772 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
PDE6D-202ENST00000409772 HTATSF1O43719 755 aaKnown RBP22.73■■□□□ 1.23
PDE6D-202ENST00000409772 POLD1P28340 1107 aa22.73■■□□□ 1.23
PDE6D-202ENST00000409772 RC3H1Q5TC82 1133 aaKnown RBP22.73■■□□□ 1.23
PDE6D-202ENST00000409772 C5P01031 1676 aa22.73■■□□□ 1.23
PDE6D-202ENST00000409772 PTCD1O75127 700 aaKnown RBP22.72■■□□□ 1.23
PDE6D-202ENST00000409772 SSFA2P28290 1259 aa22.72■■□□□ 1.23
PDE6D-202ENST00000409772 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
PDE6D-202ENST00000409772 PTGER2P43116 358 aa22.71■■□□□ 1.23
PDE6D-202ENST00000409772 ITPK1Q13572 414 aa22.71■■□□□ 1.23
PDE6D-202ENST00000409772 LINC00116Q8NCU8 138 aa22.71■■□□□ 1.23
PDE6D-202ENST00000409772 TAF1LQ8IZX4 1826 aa22.71■■□□□ 1.23
PDE6D-202ENST00000409772 TTC5Q8N0Z6 440 aa22.7■■□□□ 1.22
PDE6D-202ENST00000409772 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
PDE6D-202ENST00000409772 PRKRIP1Q9H875 184 aaPredicted RBP22.7■■□□□ 1.22
PDE6D-202ENST00000409772 C4BP0C0L5 1744 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 ZNF831Q5JPB2 1677 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 GNPATO15228 680 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 ARXQ96QS3 562 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 SGIP1Q9BQI5 828 aa22.68■■□□□ 1.22
PDE6D-202ENST00000409772 RTCBQ9Y3I0 505 aaKnown RBP22.68■■□□□ 1.22
PDE6D-202ENST00000409772 MAPK8IP3Q9UPT6 1336 aa22.67■■□□□ 1.22
PDE6D-202ENST00000409772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.67■■□□□ 1.22
PDE6D-202ENST00000409772 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
PDE6D-202ENST00000409772 VSIG10Q8N0Z9 540 aa22.67■■□□□ 1.22
PDE6D-202ENST00000409772 SLC4A9Q96Q91 983 aa22.67■■□□□ 1.22
PDE6D-202ENST00000409772 MRC1P22897 1456 aa22.66■■□□□ 1.22
PDE6D-202ENST00000409772 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
PDE6D-202ENST00000409772 ADRA2BP18089 450 aa22.66■■□□□ 1.22
PDE6D-202ENST00000409772 ADAMTS7Q9UKP4 1686 aa22.65■■□□□ 1.22
PDE6D-202ENST00000409772 PHF14O94880 888 aa22.65■■□□□ 1.22
PDE6D-202ENST00000409772 SLC39A6Q13433 755 aa22.65■■□□□ 1.22
PDE6D-202ENST00000409772 CEMIPQ8WUJ3 1361 aa22.64■■□□□ 1.22
PDE6D-202ENST00000409772 RPS6KA4O75676 772 aa22.64■■□□□ 1.21
PDE6D-202ENST00000409772 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
PDE6D-202ENST00000409772 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
PDE6D-202ENST00000409772 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.21
PDE6D-202ENST00000409772 TEX13AQ9BXU3 409 aaPredicted RBP22.64■■□□□ 1.21
PDE6D-202ENST00000409772 BTBD11A6QL63 1104 aa22.63■■□□□ 1.21
PDE6D-202ENST00000409772 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
PDE6D-202ENST00000409772 STARD3NLO95772 234 aa22.61■■□□□ 1.21
PDE6D-202ENST00000409772 CRKLP46109 303 aaKnown RBP22.61■■□□□ 1.21
PDE6D-202ENST00000409772 NFE2L2Q16236 605 aa22.61■■□□□ 1.21
PDE6D-202ENST00000409772 TUBGCP6Q96RT7 1819 aa22.61■■□□□ 1.21
PDE6D-202ENST00000409772 RFC4P35249 363 aa22.6■■□□□ 1.21
PDE6D-202ENST00000409772 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
PDE6D-202ENST00000409772 SYT17Q9BSW7 474 aa22.6■■□□□ 1.21
PDE6D-202ENST00000409772 TAF7Q15545 349 aaPredicted RBP22.59■■□□□ 1.21
PDE6D-202ENST00000409772 MCM10Q7L590 875 aa22.59■■□□□ 1.21
PDE6D-202ENST00000409772 FHDC1Q9C0D6 1143 aaPredicted RBP22.59■■□□□ 1.21
PDE6D-202ENST00000409772 UBR3Q6ZT12 1888 aa22.59■■□□□ 1.21
PDE6D-202ENST00000409772 DNAJC10Q8IXB1 793 aa22.58■■□□□ 1.21
PDE6D-202ENST00000409772 NLGN1Q8N2Q7 840 aa22.58■■□□□ 1.21
PDE6D-202ENST00000409772 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.21
PDE6D-202ENST00000409772 ARHGEF1Q92888 912 aaKnown RBP22.58■■□□□ 1.21
PDE6D-202ENST00000409772 CCDC87Q9NVE4 849 aa22.58■■□□□ 1.21
PDE6D-202ENST00000409772 CYP19A1P11511 503 aaPredicted RBP22.57■■□□□ 1.2
PDE6D-202ENST00000409772 LMOD3Q0VAK6 560 aa22.56■■□□□ 1.2
PDE6D-202ENST00000409772 MSL1Q68DK7 614 aa22.56■■□□□ 1.2
PDE6D-202ENST00000409772 AMIGO3Q86WK7 504 aa22.56■■□□□ 1.2
PDE6D-202ENST00000409772 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
PDE6D-202ENST00000409772 ANP32CO43423 234 aa22.55■■□□□ 1.2
PDE6D-202ENST00000409772 INTS5Q6P9B9 1019 aaKnown RBP22.55■■□□□ 1.2
PDE6D-202ENST00000409772 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
PDE6D-202ENST00000409772 COL24A1Q17RW2 1714 aa22.54■■□□□ 1.2
PDE6D-202ENST00000409772 CICQ96RK0 1608 aaPredicted RBP22.54■■□□□ 1.2
PDE6D-202ENST00000409772 HEG1Q9ULI3 1381 aa22.54■■□□□ 1.2
PDE6D-202ENST00000409772 RIPK4P57078 832 aa22.54■■□□□ 1.2
PDE6D-202ENST00000409772 DCTN1Q14203 1278 aa22.54■■□□□ 1.2
PDE6D-202ENST00000409772 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
PDE6D-202ENST00000409772 KCPQ6ZWJ8 1503 aa22.53■■□□□ 1.2
PDE6D-202ENST00000409772 SMIM5Q71RC9 77 aa22.53■■□□□ 1.2
PDE6D-202ENST00000409772 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
PDE6D-202ENST00000409772 ADAMTS8Q9UP79 889 aa22.53■■□□□ 1.2
PDE6D-202ENST00000409772 ZPR1O75312 459 aa22.52■■□□□ 1.2
PDE6D-202ENST00000409772 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
PDE6D-202ENST00000409772 SNRPA1P09661 255 aaKnown RBP22.51■■□□□ 1.19
PDE6D-202ENST00000409772 CD2APQ9Y5K6 639 aa22.51■■□□□ 1.19
PDE6D-202ENST00000409772 SIPA1L3O60292 1781 aaPredicted RBP22.5■■□□□ 1.19
PDE6D-202ENST00000409772 MYH14Q7Z406 1995 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms