RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LARP1BQ659C4 914 aaKnown RBP9.85□□□□□ -0.83
SCN9A-203ENST00000409672 EXOC5O00471 708 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 MYO1BO43795 1136 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 POTEJP0CG39 1038 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 CTNNA2P26232 953 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-203ENST00000409672 NLRP5P59047 1200 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 CCDC178Q5BJE1 867 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-203ENST00000409672 RBM10P98175 930 aaKnown RBP9.85□□□□□ -0.83
SCN9A-203ENST00000409672 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 RTEL1-TNFRSF6BF6WH68 1400 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 NAPBQ9H115 298 aa9.85□□□□□ -0.83
SCN9A-203ENST00000409672 SYCP3Q8IZU3 236 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-203ENST00000409672 PRKG1Q13976 671 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 CCDC8Q9H0W5 538 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-203ENST00000409672 LRSAM1Q6UWE0 723 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 PRKRIP1Q9H875 184 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-203ENST00000409672 EZRP15311 586 aaKnown RBP9.84□□□□□ -0.83
SCN9A-203ENST00000409672 CASTP20810 708 aaKnown RBP9.84□□□□□ -0.83
SCN9A-203ENST00000409672 ZBTB21Q9ULJ3 1066 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 LMAN1P49257 510 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 RGS22Q8NE09 1264 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 ST5P78524 1137 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 NF2P35240 595 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 EXOC6BQ9Y2D4 811 aa9.84□□□□□ -0.83
SCN9A-203ENST00000409672 ZNF526Q8TF50 670 aaPredicted RBP9.83□□□□□ -0.84
SCN9A-203ENST00000409672 IMMTQ16891 758 aaKnown RBP9.83□□□□□ -0.84
SCN9A-203ENST00000409672 TSPY26PQ9H489 355 aa9.83□□□□□ -0.84
SCN9A-203ENST00000409672 OTUD6BQ8N6M0 293 aa9.83□□□□□ -0.84
SCN9A-203ENST00000409672 CCT2P78371 535 aaKnown RBP9.83□□□□□ -0.84
SCN9A-203ENST00000409672 IFIT5Q13325 482 aaKnown RBP9.83□□□□□ -0.84
SCN9A-203ENST00000409672 GSTTP1A0A1W2PQM5 241 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 IFIT1P09914 478 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 TCERG1LQ5VWI1 586 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 BLOC1S2Q6QNY1 142 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 DDX46Q7L014 1031 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 DNAI2Q9GZS0 605 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 PDRG1Q9NUG6 133 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 SMC1AQ14683 1233 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 DYDC1Q8WWB3 177 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 SNRKQ9NRH2 765 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 PABPN1LA6NDY0 278 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 MYCP01106 439 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 CACNA2D4Q7Z3S7 1137 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 SCAPERQ9BY12 1400 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 PRPF4BQ13523 1007 aaKnown RBP9.82□□□□□ -0.84
SCN9A-203ENST00000409672 TAF12Q16514 161 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
SCN9A-203ENST00000409672 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 PPP1R12BO60237 982 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-203ENST00000409672 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 PANK2Q9BZ23 570 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 ERCC4Q92889 916 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-203ENST00000409672 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 HAND2P61296 217 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 LARP1Q6PKG0 1096 aaKnown RBP9.81□□□□□ -0.84
SCN9A-203ENST00000409672 CPLX3Q8WVH0 158 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 ZNF287Q9HBT7 754 aa9.81□□□□□ -0.84
SCN9A-203ENST00000409672 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 FILIP1Q7Z7B0 1213 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 SPATA32Q96LK8 384 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 PRC1O43663 620 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 SLC5A1P13866 664 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 RABEP1Q15276 862 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 F6X3S4 739 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 NBPF6Q5VWK0 638 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 NBPF5PQ86XG9 351 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-203ENST00000409672 NBPF4Q96M43 638 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 SYNCQ9H7C4 482 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 BEGAINQ9BUH8 593 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 EPB41L2O43491 1005 aaKnown RBP9.8□□□□□ -0.84
SCN9A-203ENST00000409672 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-203ENST00000409672 CCT4P50991 539 aaKnown RBP9.8□□□□□ -0.84
SCN9A-203ENST00000409672 CABP5Q9NP86 173 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 DACH1Q9UI36 760 aa9.8□□□□□ -0.84
SCN9A-203ENST00000409672 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 ZNF397Q8NF99 534 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-203ENST00000409672 SSX2IPQ9Y2D8 614 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 NUDT16Q96DE0 195 aaKnown RBP9.79□□□□□ -0.84
SCN9A-203ENST00000409672 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 TSPY2A6NKD2 308 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 CCDC83Q8IWF9 413 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 TAF4BQ92750 862 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 GJC1P36383 396 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 MAP2K1Q02750 393 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-203ENST00000409672 CDKL5O76039 1030 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-203ENST00000409672 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
SCN9A-203ENST00000409672 PDCP20941 246 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms