RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 DZIP1Q86YF9 867 aaKnown RBP29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 DBF4Q9UBU7 674 aaPredicted RBP29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 ZNHIT6Q9NWK9 470 aaKnown RBP29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 MYO6Q9UM54 1294 aa29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
SPIRE1-202ENST00000409402 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SPIRE1-202ENST00000409402 DNAAF4Q8WXU2 420 aa29.55■■■□□ 2.32
SPIRE1-202ENST00000409402 ANKRD18BA2A2Z9 1011 aa29.54■■■□□ 2.32
SPIRE1-202ENST00000409402 TEX35Q5T0J7 233 aa29.54■■■□□ 2.32
SPIRE1-202ENST00000409402 C14orf93Q9H972 538 aaKnown RBP29.54■■■□□ 2.32
SPIRE1-202ENST00000409402 FBXO3Q9UK99 471 aa29.54■■■□□ 2.32
SPIRE1-202ENST00000409402 MSH6P52701 1360 aa29.54■■■□□ 2.32
SPIRE1-202ENST00000409402 WDHD1O75717 1129 aaPredicted RBP29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 MX1P20591 662 aa29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 U3KPZ7 1027 aaPredicted RBP29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 SCAF11Q99590 1463 aaKnown RBP29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 NSD2O96028 1365 aa29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 CCP110O43303 1012 aa29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 MKNK2Q9HBH9 465 aa29.53■■■□□ 2.32
SPIRE1-202ENST00000409402 MAP3K12Q12852 859 aa29.52■■■□□ 2.32
SPIRE1-202ENST00000409402 SSBP05455 408 aaKnown RBP eCLIP29.52■■■□□ 2.32
SPIRE1-202ENST00000409402 RSPH6AQ9H0K4 717 aa29.52■■■□□ 2.32
SPIRE1-202ENST00000409402 TANGO6Q9C0B7 1094 aa29.51■■■□□ 2.32
SPIRE1-202ENST00000409402 SERPINC1P01008 464 aa29.51■■■□□ 2.31
SPIRE1-202ENST00000409402 SLF2Q8IX21 1173 aa29.51■■■□□ 2.31
SPIRE1-202ENST00000409402 TNMDQ9H2S6 317 aa29.51■■■□□ 2.31
SPIRE1-202ENST00000409402 PIBF1Q8WXW3 757 aa29.51■■■□□ 2.31
SPIRE1-202ENST00000409402 TEX14Q8IWB6 1497 aa29.51■■■□□ 2.31
SPIRE1-202ENST00000409402 SEC63Q9UGP8 760 aaKnown RBP29.5■■■□□ 2.31
SPIRE1-202ENST00000409402 CFAP45Q9UL16 551 aa29.5■■■□□ 2.31
SPIRE1-202ENST00000409402 MINDY4BA8MYZ0 360 aa29.49■■■□□ 2.31
SPIRE1-202ENST00000409402 CCDC192P0DO97 292 aa29.49■■■□□ 2.31
SPIRE1-202ENST00000409402 HSP90AA2PQ14568 343 aaPredicted RBP29.49■■■□□ 2.31
SPIRE1-202ENST00000409402 ACEP12821 1306 aa29.48■■■□□ 2.31
SPIRE1-202ENST00000409402 ANKRD24Q8TF21 1146 aa29.48■■■□□ 2.31
SPIRE1-202ENST00000409402 NAPBQ9H115 298 aa29.48■■■□□ 2.31
SPIRE1-202ENST00000409402 LUC7LQ9NQ29 371 aaKnown RBP29.48■■■□□ 2.31
SPIRE1-202ENST00000409402 SSH1Q8WYL5 1049 aa29.48■■■□□ 2.31
SPIRE1-202ENST00000409402 A0A087WZG4 1122 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 PDIA4P13667 645 aaKnown RBP29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 FAM43AQ8N2R8 423 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 BOLA2Q9H3K6 86 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 SPATA32Q96LK8 384 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 MAP3K1Q13233 1512 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 CASTP20810 708 aaKnown RBP29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 HSP90B2PQ58FF3 399 aa29.47■■■□□ 2.31
SPIRE1-202ENST00000409402 PPFIBP1Q86W92 1011 aa29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 DHX8Q14562 1220 aaKnown RBP29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 ZBTB3Q9H5J0 574 aa29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 TNIP1Q15025 636 aa29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 CCDC184Q52MB2 194 aa29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 CEP131Q9UPN4 1083 aa29.46■■■□□ 2.31
SPIRE1-202ENST00000409402 TOM1O60784 492 aa29.45■■■□□ 2.31
SPIRE1-202ENST00000409402 GPTP24298 496 aa29.45■■■□□ 2.31
SPIRE1-202ENST00000409402 PATL2C9JE40 543 aaKnown RBP29.45■■■□□ 2.3
SPIRE1-202ENST00000409402 KDM5BQ9UGL1 1544 aa29.44■■■□□ 2.3
SPIRE1-202ENST00000409402 F6X3S4 739 aa29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 MATR3P43243 847 aaKnown RBP eCLIP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 RARSP54136 660 aaKnown RBP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 CEP57L1Q8IYX8 460 aa29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 DEF6Q9H4E7 631 aa29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 CDC5LQ99459 802 aaKnown RBP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 ZNF219Q9P2Y4 722 aaPredicted RBP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 PTPRCP08575 1304 aa29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 TXLNBQ8N3L3 684 aa29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 BCL11BQ9C0K0 894 aaPredicted RBP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 ZNF444Q8N0Y2 327 aaPredicted RBP29.43■■■□□ 2.3
SPIRE1-202ENST00000409402 C6orf229H3BNL8 230 aa29.42■■■□□ 2.3
SPIRE1-202ENST00000409402 PPP1R42Q7Z4L9 355 aa29.42■■■□□ 2.3
SPIRE1-202ENST00000409402 ERCC4Q92889 916 aaPredicted RBP29.42■■■□□ 2.3
SPIRE1-202ENST00000409402 CHRNA2Q15822 529 aa29.42■■■□□ 2.3
SPIRE1-202ENST00000409402 LRRFIP2Q9Y608 721 aaKnown RBP29.42■■■□□ 2.3
SPIRE1-202ENST00000409402 SMARCA5O60264 1052 aaPredicted RBP29.41■■■□□ 2.3
SPIRE1-202ENST00000409402 CCDC196A0A1B0GTZ2 297 aa29.41■■■□□ 2.3
SPIRE1-202ENST00000409402 RFC4P35249 363 aa29.41■■■□□ 2.3
SPIRE1-202ENST00000409402 TTLL12Q14166 644 aaPredicted RBP29.41■■■□□ 2.3
SPIRE1-202ENST00000409402 DDX46Q7L014 1031 aaKnown RBP29.41■■■□□ 2.3
SPIRE1-202ENST00000409402 CWC25Q9NXE8 425 aaPredicted RBP29.4■■■□□ 2.3
SPIRE1-202ENST00000409402 FLIIQ13045 1269 aa29.4■■■□□ 2.3
SPIRE1-202ENST00000409402 PRPF40BQ6NWY9 871 aaKnown RBP29.39■■■□□ 2.3
SPIRE1-202ENST00000409402 CCDC8Q9H0W5 538 aaPredicted RBP29.39■■■□□ 2.3
SPIRE1-202ENST00000409402 MAP3K2Q9Y2U5 619 aa29.39■■■□□ 2.3
SPIRE1-202ENST00000409402 UBAP1LF5GYI3 381 aa29.39■■■□□ 2.3
SPIRE1-202ENST00000409402 CTCFLQ8NI51 663 aaPredicted RBP29.39■■■□□ 2.3
SPIRE1-202ENST00000409402 CBFA2T2O43439 604 aa29.39■■■□□ 2.29
SPIRE1-202ENST00000409402 NKTRP30414 1462 aaKnown RBP29.39■■■□□ 2.29
SPIRE1-202ENST00000409402 NPHP3Q7Z494 1330 aa29.38■■■□□ 2.29
SPIRE1-202ENST00000409402 IQCA1Q86XH1 822 aa29.38■■■□□ 2.29
SPIRE1-202ENST00000409402 RNF41Q9H4P4 317 aaPredicted RBP29.38■■■□□ 2.29
SPIRE1-202ENST00000409402 DDX11Q96FC9 970 aa29.38■■■□□ 2.29
SPIRE1-202ENST00000409402 ZNF771Q7L3S4 317 aaPredicted RBP29.38■■■□□ 2.29
SPIRE1-202ENST00000409402 TTC21AQ8NDW8 1320 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 SNRPA1P09661 255 aaKnown RBP29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 BACH2Q9BYV9 841 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 UHRF1BP1LA0JNW5 1464 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 ANKRD36BQ8N2N9 1353 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 ASXL2Q76L83 1435 aa29.37■■■□□ 2.29
SPIRE1-202ENST00000409402 RANBP6O60518 1105 aaKnown RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms