RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
LSM5-202ENST00000409292 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
LSM5-202ENST00000409292 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
LSM5-202ENST00000409292 ZNF827Q17R98 1081 aa10.87□□□□□ -0.67
LSM5-202ENST00000409292 FLAD1Q8NFF5 587 aa10.87□□□□□ -0.67
LSM5-202ENST00000409292 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
LSM5-202ENST00000409292 SLC12A5Q9H2X9 1139 aa10.87□□□□□ -0.67
LSM5-202ENST00000409292 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
LSM5-202ENST00000409292 CGNL1Q0VF96 1302 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 BTAF1O14981 1849 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 SMG6Q86US8 1419 aaKnown RBP10.86□□□□□ -0.67
LSM5-202ENST00000409292 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
LSM5-202ENST00000409292 RAPGEF4Q8WZA2 1011 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 ANKRD36BQ8N2N9 1353 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 USP47Q96K76 1375 aa10.86□□□□□ -0.67
LSM5-202ENST00000409292 LTN1O94822 1766 aa10.85□□□□□ -0.67
LSM5-202ENST00000409292 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
LSM5-202ENST00000409292 FAM208AQ9UK61 1670 aaKnown RBP10.84□□□□□ -0.67
LSM5-202ENST00000409292 USP54Q70EL1 1684 aa10.83□□□□□ -0.68
LSM5-202ENST00000409292 A0A1W2PP64 1363 aa10.83□□□□□ -0.68
LSM5-202ENST00000409292 TATP17735 454 aaPredicted RBP10.83□□□□□ -0.68
LSM5-202ENST00000409292 PAPPAQ13219 1627 aa10.83□□□□□ -0.68
LSM5-202ENST00000409292 HOXC9P31274 260 aa10.82□□□□□ -0.68
LSM5-202ENST00000409292 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
LSM5-202ENST00000409292 RTL1A6NKG5 1358 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 SMARCC1Q92922 1105 aaPredicted RBP10.81□□□□□ -0.68
LSM5-202ENST00000409292 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 PCDH11XQ9BZA7 1347 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 PCDH11YQ9BZA8 1340 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
LSM5-202ENST00000409292 AK7Q96M32 723 aa10.8□□□□□ -0.68
LSM5-202ENST00000409292 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
LSM5-202ENST00000409292 NSD3Q9BZ95 1437 aa10.8□□□□□ -0.68
LSM5-202ENST00000409292 KCNQ4P56696 695 aa10.79□□□□□ -0.68
LSM5-202ENST00000409292 TMF1P82094 1093 aa10.79□□□□□ -0.68
LSM5-202ENST00000409292 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
LSM5-202ENST00000409292 MPRIPQ6WCQ1 1025 aa10.78□□□□□ -0.68
LSM5-202ENST00000409292 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
LSM5-202ENST00000409292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.684e-7■□□□□ 10.5
LSM5-202ENST00000409292 ST20-MTHFSA0A0A6YYL1 179 aa10.77□□□□□ -0.69
LSM5-202ENST00000409292 MSL1Q68DK7 614 aa10.77□□□□□ -0.69
LSM5-202ENST00000409292 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
LSM5-202ENST00000409292 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
LSM5-202ENST00000409292 DOT1LQ8TEK3 1739 aa10.76□□□□□ -0.69
LSM5-202ENST00000409292 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
LSM5-202ENST00000409292 RRS1Q15050 365 aaKnown RBP10.76□□□□□ -0.69
LSM5-202ENST00000409292 NBPF6Q5VWK0 638 aa10.76□□□□□ -0.69
LSM5-202ENST00000409292 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
LSM5-202ENST00000409292 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
LSM5-202ENST00000409292 NBPF4Q96M43 638 aa10.76□□□□□ -0.69
LSM5-202ENST00000409292 SPG7Q9UQ90 795 aa10.76□□□□□ -0.69
LSM5-202ENST00000409292 YBX3P16989 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
LSM5-202ENST00000409292 IFFO2Q5TF58 517 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 USHBP1Q8N6Y0 703 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 SLAIN1Q8ND83 568 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 GGNBP2Q9H3C7 697 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 INSRP06213 1382 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 FLT4P35916 1363 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 LY75O60449 1722 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
LSM5-202ENST00000409292 MEGF6O75095 1541 aa10.74□□□□□ -0.69
LSM5-202ENST00000409292 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
LSM5-202ENST00000409292 NSD2O96028 1365 aa10.74□□□□□ -0.69
LSM5-202ENST00000409292 FYB1O15117 783 aa10.73□□□□□ -0.69
LSM5-202ENST00000409292 PHF14O94880 888 aa10.73□□□□□ -0.69
LSM5-202ENST00000409292 SSFA2P28290 1259 aa10.73□□□□□ -0.69
LSM5-202ENST00000409292 TESK2Q96S53 571 aa10.73□□□□□ -0.69
LSM5-202ENST00000409292 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
LSM5-202ENST00000409292 COL24A1Q17RW2 1714 aa10.72□□□□□ -0.69
LSM5-202ENST00000409292 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
LSM5-202ENST00000409292 HSPA6P17066 643 aa10.72□□□□□ -0.69
LSM5-202ENST00000409292 FBLN1P23142 703 aa10.72□□□□□ -0.69
LSM5-202ENST00000409292 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
LSM5-202ENST00000409292 ZNF526Q8TF50 670 aaPredicted RBP10.72□□□□□ -0.69
LSM5-202ENST00000409292 TMOD3Q9NYL9 352 aa10.72□□□□□ -0.69
LSM5-202ENST00000409292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
LSM5-202ENST00000409292 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
LSM5-202ENST00000409292 TUBGCP6Q96RT7 1819 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 C5P01031 1676 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 LOC102724428A0A0B4J2F2 783 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 POTEMA6NI47 508 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 SIK1P57059 783 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
LSM5-202ENST00000409292 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
LSM5-202ENST00000409292 GNPATO15228 680 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 CYP27B1O15528 508 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 ATP6V1AP38606 617 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 POTEGQ6S5H5 508 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 IFNL2Q8IZJ0 200 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 NLGN1Q8N2Q7 840 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 PIGBQ92521 554 aa10.69□□□□□ -0.7
LSM5-202ENST00000409292 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
LSM5-202ENST00000409292 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
LSM5-202ENST00000409292 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
LSM5-202ENST00000409292 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms