RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 CCAR1Q8IX12 1150 aaKnown RBP5.61□□□□□ -1.51
GTDC1-206ENST00000409214 NEUROD6Q96NK8 337 aa5.61□□□□□ -1.51
GTDC1-206ENST00000409214 CEP162Q5TB80 1403 aa5.6□□□□□ -1.51
GTDC1-206ENST00000409214 XRCC5P13010 732 aaKnown RBP5.6□□□□□ -1.51
GTDC1-206ENST00000409214 ARMC5Q96C12 935 aa5.6□□□□□ -1.51
GTDC1-206ENST00000409214 VTI1BQ9UEU0 232 aa5.6□□□□□ -1.51
GTDC1-206ENST00000409214 TRPC6Q9Y210 931 aa5.6□□□□□ -1.51
GTDC1-206ENST00000409214 ANKMY2Q8IV38 441 aa5.6□□□□□ -1.51
GTDC1-206ENST00000409214 CFAP99D6REC4 459 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 ENPP3O14638 875 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 PER1O15534 1290 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 CD46P15529 392 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 EN1Q05925 392 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 PNISRQ8TF01 805 aaKnown RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 C12orf49Q9H741 205 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 ARHGEF10LQ9HCE6 1279 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 FANCLQ9NW38 375 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 LZTS3O60299 673 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 FAM163BP0C2L3 166 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 FBXO45P0C2W1 286 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 TSGA10IPQ3SY00 556 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 DALRD3Q5D0E6 543 aaKnown RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 SCYL1Q96KG9 808 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 MRS2Q9HD23 443 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 INTUQ9ULD6 942 aa5.59□□□□□ -1.51
GTDC1-206ENST00000409214 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-206ENST00000409214 EVI5O60447 810 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 SORBS3O60504 671 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 FMNL1O95466 1100 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 CTSHP09668 335 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 HCLS1P14317 486 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 XPCQ01831 940 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 SERINC3Q13530 473 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 ZNF280DQ6N043 979 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 LDHBP07195 334 aaKnown RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 TKFCQ3LXA3 575 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 ZSCAN29Q8IWY8 852 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 POLD1P28340 1107 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 NAA30Q147X3 362 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 TUSC1Q2TAM9 212 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 TTC30BQ8N4P2 665 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 INO80BQ9C086 356 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-206ENST00000409214 PTPRHQ9HD43 1115 aa5.58□□□□□ -1.52
GTDC1-206ENST00000409214 RPGRIP1LQ68CZ1 1315 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 FAM193AP78312 1265 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 TAS1R3Q7RTX0 852 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 C1orf131Q8NDD1 294 aaKnown RBP5.57□□□□□ -1.52
GTDC1-206ENST00000409214 MRFAP1L1Q96HT8 127 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 C8orf48Q96LL4 319 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 SRPK1Q96SB4 655 aaKnown RBP5.57□□□□□ -1.52
GTDC1-206ENST00000409214 DDX11L8A8MPP1 907 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 DIXDC1Q155Q3 683 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 C14orf80Q86SX3 495 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 OGFOD1Q8N543 542 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
GTDC1-206ENST00000409214 SENP7Q9BQF6 1050 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-206ENST00000409214 BSDC1Q9NW68 430 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-206ENST00000409214 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
GTDC1-206ENST00000409214 SETD1BQ9UPS6 1966 aaKnown RBP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 DYTNA2CJ06 578 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 DKK1O94907 266 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 NUTM1Q86Y26 1132 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 ENOX1Q8TC92 643 aaKnown RBP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 PPCSQ9HAB8 311 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 CXXC1Q9P0U4 656 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 C3orf80F5H4A9 247 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 TREHO43280 583 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 PTMAP06454 111 aaKnown RBP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 CD53P19397 219 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 TMC4Q7Z404 712 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 ZNF408Q9H9D4 720 aa5.56□□□□□ -1.52
GTDC1-206ENST00000409214 SRA1Q9HD15 236 aaKnown RBP5.56□□□□□ -1.52
GTDC1-206ENST00000409214 ESYT3A0FGR9 886 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 KANK3Q6NY19 840 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 MICALL2Q8IY33 904 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SH3TC2Q8TF17 1288 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 PAGR1Q9BTK6 254 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 BPNT1O95861 308 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 FGAP02671 866 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 DAB2P98082 770 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 GNL2Q13823 731 aaKnown RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SAFB2Q14151 953 aaKnown RBP eCLIP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 PLEKHG4Q58EX7 1191 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 CHMP4BQ9H444 224 aaKnown RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 NEUROD4Q9HD90 331 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 ENAMQ9NRM1 1142 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 TPX2Q9ULW0 747 aaKnown RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 KIF3CO14782 793 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 IGHA2P01877 340 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 ATF4P18848 351 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 POU3F3P20264 500 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SOX11P35716 441 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 NR1H3Q13133 447 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SIM2Q14190 667 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms