RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 POLA2Q14181 598 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 INSRP06213 1382 aa12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-203ENST00000409129 JMYQ8N9B5 988 aa12.75□□□□□ -0.37
NIF3L1-203ENST00000409129 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
NIF3L1-203ENST00000409129 FLT4P35916 1363 aa12.74□□□□□ -0.37
NIF3L1-203ENST00000409129 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
NIF3L1-203ENST00000409129 FKBP8Q14318 412 aa12.74□□□□□ -0.37
NIF3L1-203ENST00000409129 SBF1O95248 1867 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 ABCB7O75027 752 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
NIF3L1-203ENST00000409129 SLC34A2O95436 690 aa12.71□□□□□ -0.37
NIF3L1-203ENST00000409129 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
NIF3L1-203ENST00000409129 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 KIF20BQ96Q89 1820 aa12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 CYP27B1O15528 508 aa12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 MPRIPQ6WCQ1 1025 aa12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-203ENST00000409129 KCPQ6ZWJ8 1503 aa12.69□□□□□ -0.38
NIF3L1-203ENST00000409129 PHF14O94880 888 aa12.69□□□□□ -0.38
NIF3L1-203ENST00000409129 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
NIF3L1-203ENST00000409129 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
NIF3L1-203ENST00000409129 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
NIF3L1-203ENST00000409129 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
NIF3L1-203ENST00000409129 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
NIF3L1-203ENST00000409129 HSPA1AP0DMV8 641 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 HSPA1BP0DMV9 641 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 EYA1Q99502 592 aa12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
NIF3L1-203ENST00000409129 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
NIF3L1-203ENST00000409129 PIGBQ92521 554 aa12.66□□□□□ -0.38
NIF3L1-203ENST00000409129 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
NIF3L1-203ENST00000409129 POLR3GLQ9BT43 218 aa12.65□□□□□ -0.38
NIF3L1-203ENST00000409129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
NIF3L1-203ENST00000409129 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
NIF3L1-203ENST00000409129 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
NIF3L1-203ENST00000409129 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-203ENST00000409129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-203ENST00000409129 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
NIF3L1-203ENST00000409129 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
NIF3L1-203ENST00000409129 AK7Q96M32 723 aa12.63□□□□□ -0.39
NIF3L1-203ENST00000409129 PHKG2P15735 406 aa12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 C9orf131Q5VYM1 1079 aa12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
NIF3L1-203ENST00000409129 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
NIF3L1-203ENST00000409129 SIK1P57059 783 aa12.61□□□□□ -0.39
NIF3L1-203ENST00000409129 FSTL1Q12841 308 aa12.61□□□□□ -0.39
NIF3L1-203ENST00000409129 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
NIF3L1-203ENST00000409129 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
NIF3L1-203ENST00000409129 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 MMP10P09238 476 aa12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 PANK3Q9H999 370 aa12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 C10orf71Q711Q0 1435 aa12.6□□□□□ -0.39
NIF3L1-203ENST00000409129 SSFA2P28290 1259 aa12.59□□□□□ -0.39
NIF3L1-203ENST00000409129 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
NIF3L1-203ENST00000409129 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 FCHSD2O94868 740 aa12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 DPEP1P16444 411 aa12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 ITPK1Q13572 414 aa12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 MYH14Q7Z406 1995 aaKnown RBP12.58□□□□□ -0.4
NIF3L1-203ENST00000409129 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
NIF3L1-203ENST00000409129 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-203ENST00000409129 COL5A3P25940 1745 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-203ENST00000409129 GNPATO15228 680 aa12.56□□□□□ -0.4
NIF3L1-203ENST00000409129 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-203ENST00000409129 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
NIF3L1-203ENST00000409129 DCAF5Q96JK2 942 aa12.56□□□□□ -0.4
NIF3L1-203ENST00000409129 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
NIF3L1-203ENST00000409129 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
NIF3L1-203ENST00000409129 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
NIF3L1-203ENST00000409129 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
NIF3L1-203ENST00000409129 KCNA3P22001 575 aa12.54□□□□□ -0.4
NIF3L1-203ENST00000409129 TGFB2P61812 414 aa12.54□□□□□ -0.4
NIF3L1-203ENST00000409129 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-203ENST00000409129 SLC4A9Q96Q91 983 aa12.54□□□□□ -0.4
NIF3L1-203ENST00000409129 CABP4P57796 275 aa12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 FAM161AQ3B820 660 aa12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms