RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-205ENST00000409057 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
PBRM1-205ENST00000409057 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
PBRM1-205ENST00000409057 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 ZFYVE27Q5T4F4 411 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 CCDC69A6NI79 296 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 CLCN1P35523 988 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
PBRM1-205ENST00000409057 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
PBRM1-205ENST00000409057 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
PBRM1-205ENST00000409057 IDI1Q13907 227 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
PBRM1-205ENST00000409057 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
PBRM1-205ENST00000409057 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
PBRM1-205ENST00000409057 NEMFO60524 1076 aa12.53□□□□□ -0.4
PBRM1-205ENST00000409057 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
PBRM1-205ENST00000409057 DYNC1I1O14576 645 aa12.53□□□□□ -0.4
PBRM1-205ENST00000409057 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
PBRM1-205ENST00000409057 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
PBRM1-205ENST00000409057 KCNH5Q8NCM2 988 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 CD109Q6YHK3 1445 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 CTAGE5O15320 804 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 IGHDP01880 384 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 TNNT1P13805 278 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.4
PBRM1-205ENST00000409057 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.4
PBRM1-205ENST00000409057 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.41
PBRM1-205ENST00000409057 F6X3S4 739 aa12.52□□□□□ -0.41
PBRM1-205ENST00000409057 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
PBRM1-205ENST00000409057 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
PBRM1-205ENST00000409057 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
PBRM1-205ENST00000409057 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
PBRM1-205ENST00000409057 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
PBRM1-205ENST00000409057 WASF1Q92558 559 aa12.51□□□□□ -0.41
PBRM1-205ENST00000409057 NSD2O96028 1365 aa12.51□□□□□ -0.41
PBRM1-205ENST00000409057 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
PBRM1-205ENST00000409057 PRIMPOLQ96LW4 560 aa12.51□□□□□ -0.41
PBRM1-205ENST00000409057 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
PBRM1-205ENST00000409057 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
PBRM1-205ENST00000409057 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
PBRM1-205ENST00000409057 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
PBRM1-205ENST00000409057 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
PBRM1-205ENST00000409057 SYCP1Q15431 976 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
PBRM1-205ENST00000409057 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 NOS1P29475 1434 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 URI1O94763 535 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-205ENST00000409057 ADCY5O95622 1261 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 CALCOCO1Q9P1Z2 691 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-205ENST00000409057 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
PBRM1-205ENST00000409057 FAM193AP78312 1265 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
PBRM1-205ENST00000409057 IMMTQ16891 758 aaKnown RBP12.49□□□□□ -0.41
PBRM1-205ENST00000409057 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
PBRM1-205ENST00000409057 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 POGZQ7Z3K3 1410 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 MAPKBP1O60336 1514 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 GSDMDP57764 484 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
PBRM1-205ENST00000409057 CAVIN2O95810 425 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 UBAC1Q9BSL1 405 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 TOP1P11387 765 aaKnown RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 PTPRCP08575 1304 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 KIF5CO60282 957 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 GPATCH8Q9UKJ3 1502 aaKnown RBP12.48□□□□□ -0.41
PBRM1-205ENST00000409057 STX6O43752 255 aa12.48□□□□□ -0.41
PBRM1-205ENST00000409057 TDO2P48775 406 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms