RNA–Protein interactions for RNA: ENST00000409053.1

RHBDD1-203, Transcript of rhomboid domain containing 1, humanhuman

TSL 4 BASIC

Gene RHBDD1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-203ENST00000409053 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
RHBDD1-203ENST00000409053 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 KCNQ3O43525 872 aa12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
RHBDD1-203ENST00000409053 BTAF1O14981 1849 aa12.25□□□□□ -0.45
RHBDD1-203ENST00000409053 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
RHBDD1-203ENST00000409053 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
RHBDD1-203ENST00000409053 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
RHBDD1-203ENST00000409053 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
RHBDD1-203ENST00000409053 TEFQ10587 303 aa12.24□□□□□ -0.45
RHBDD1-203ENST00000409053 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
RHBDD1-203ENST00000409053 ADAMTS7Q9UKP4 1686 aa12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 MRC1P22897 1456 aa12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 ITGB4P16144 1822 aa12.23□□□□□ -0.45
RHBDD1-203ENST00000409053 ITPK1Q13572 414 aa12.22□□□□□ -0.45
RHBDD1-203ENST00000409053 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
RHBDD1-203ENST00000409053 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
RHBDD1-203ENST00000409053 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
RHBDD1-203ENST00000409053 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 SIK1P57059 783 aa12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
RHBDD1-203ENST00000409053 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
RHBDD1-203ENST00000409053 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
RHBDD1-203ENST00000409053 ZNF496Q96IT1 587 aaPredicted RBP12.2□□□□□ -0.46
RHBDD1-203ENST00000409053 LAS1LQ9Y4W2 734 aaKnown RBP12.2□□□□□ -0.46
RHBDD1-203ENST00000409053 PRAMEF22A3QJZ6 481 aa12.19□□□□□ -0.46
RHBDD1-203ENST00000409053 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
RHBDD1-203ENST00000409053 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
RHBDD1-203ENST00000409053 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
RHBDD1-203ENST00000409053 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
RHBDD1-203ENST00000409053 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 DLG5Q8TDM6 1919 aa12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
RHBDD1-203ENST00000409053 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 RREB1Q92766 1687 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 KRT24Q2M2I5 525 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
RHBDD1-203ENST00000409053 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
RHBDD1-203ENST00000409053 PAPPAQ13219 1627 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 LY75O60449 1722 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 CHL1O00533 1208 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 SLC15A2Q16348 729 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
RHBDD1-203ENST00000409053 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 TSR2Q969E8 191 aaKnown RBP12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
RHBDD1-203ENST00000409053 PHF14O94880 888 aa12.13□□□□□ -0.47
RHBDD1-203ENST00000409053 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
RHBDD1-203ENST00000409053 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
RHBDD1-203ENST00000409053 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
RHBDD1-203ENST00000409053 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
RHBDD1-203ENST00000409053 PNPLA7Q6ZV29 1317 aa12.12□□□□□ -0.47
RHBDD1-203ENST00000409053 GNPATO15228 680 aa12.12□□□□□ -0.47
RHBDD1-203ENST00000409053 AK7Q96M32 723 aa12.12□□□□□ -0.47
RHBDD1-203ENST00000409053 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
RHBDD1-203ENST00000409053 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 ELL2O00472 640 aaPredicted RBP12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 GIGYF1O75420 1035 aaPredicted RBP12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 A1BGP04217 495 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 TJP1Q07157 1748 aa12.11□□□□□ -0.47
RHBDD1-203ENST00000409053 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 MSH5O43196 834 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 GNAI1P63096 354 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 C4BP0C0L5 1744 aa12.1□□□□□ -0.47
RHBDD1-203ENST00000409053 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms