RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 SLC4A10Q6U841 1118 aa20.72■□□□□ 0.91
PIKFYVE-204ENST00000407449 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
PIKFYVE-204ENST00000407449 LGR6Q9HBX8 967 aa20.72■□□□□ 0.91
PIKFYVE-204ENST00000407449 ABCC6O95255 1503 aa20.72■□□□□ 0.91
PIKFYVE-204ENST00000407449 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 CRYBG1Q9Y4K1 1723 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 FKBP5Q13451 457 aaPredicted RBP20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 HDGFL1Q5TGJ6 251 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 CHMP4AQ9BY43 222 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 AXIN2Q9Y2T1 843 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 COL18A1P39060 1754 aa20.71■□□□□ 0.91
PIKFYVE-204ENST00000407449 TNS3Q68CZ2 1445 aa20.7■□□□□ 0.91
PIKFYVE-204ENST00000407449 NPHP3Q7Z494 1330 aa20.7■□□□□ 0.9
PIKFYVE-204ENST00000407449 MFAP1P55081 439 aaKnown RBP20.7■□□□□ 0.9
PIKFYVE-204ENST00000407449 EIF4A1P60842 406 aaKnown RBP20.7■□□□□ 0.9
PIKFYVE-204ENST00000407449 TEFQ10587 303 aa20.7■□□□□ 0.9
PIKFYVE-204ENST00000407449 ERBB3P21860 1342 aa20.7■□□□□ 0.9
PIKFYVE-204ENST00000407449 HMMRO75330 724 aa20.69■□□□□ 0.9
PIKFYVE-204ENST00000407449 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
PIKFYVE-204ENST00000407449 NECTIN2Q92692 538 aa20.69■□□□□ 0.9
PIKFYVE-204ENST00000407449 RNMTO43148 476 aaKnown RBP20.68■□□□□ 0.9
PIKFYVE-204ENST00000407449 USP35Q9P2H5 1018 aa20.67■□□□□ 0.9
PIKFYVE-204ENST00000407449 GNAI2P04899 355 aa20.67■□□□□ 0.9
PIKFYVE-204ENST00000407449 GNAI3P08754 354 aa20.67■□□□□ 0.9
PIKFYVE-204ENST00000407449 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
PIKFYVE-204ENST00000407449 HSPA2P54652 639 aa20.66■□□□□ 0.9
PIKFYVE-204ENST00000407449 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
PIKFYVE-204ENST00000407449 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
PIKFYVE-204ENST00000407449 PLEKHM2Q8IWE5 1019 aa20.65■□□□□ 0.9
PIKFYVE-204ENST00000407449 DDX17Q92841 729 aaKnown RBP20.64■□□□□ 0.9
PIKFYVE-204ENST00000407449 PLEKHG2Q9H7P9 1386 aa20.64■□□□□ 0.9
PIKFYVE-204ENST00000407449 STRCQ7RTU9 1775 aa20.64■□□□□ 0.89
PIKFYVE-204ENST00000407449 SCN11AQ9UI33 1791 aa20.63■□□□□ 0.89
PIKFYVE-204ENST00000407449 SPATA31A3Q5VYP0 1347 aa20.62■□□□□ 0.89
PIKFYVE-204ENST00000407449 KCNQ3O43525 872 aa20.62■□□□□ 0.89
PIKFYVE-204ENST00000407449 RBM25P49756 843 aaKnown RBP20.62■□□□□ 0.89
PIKFYVE-204ENST00000407449 CDC45O75419 566 aa20.61■□□□□ 0.89
PIKFYVE-204ENST00000407449 TTC22Q5TAA0 569 aa20.61■□□□□ 0.89
PIKFYVE-204ENST00000407449 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
PIKFYVE-204ENST00000407449 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
PIKFYVE-204ENST00000407449 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 GSPT1P15170 499 aaKnown RBP20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 TBC1D9Q6ZT07 1266 aa20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 RAPGEF4Q8WZA2 1011 aa20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 TBC1D2Q9BYX2 928 aa20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
PIKFYVE-204ENST00000407449 CPDO75976 1380 aa20.59■□□□□ 0.89
PIKFYVE-204ENST00000407449 NLRP2Q9NX02 1062 aa20.59■□□□□ 0.89
PIKFYVE-204ENST00000407449 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
PIKFYVE-204ENST00000407449 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
PIKFYVE-204ENST00000407449 ATP8B2P98198 1209 aa20.58■□□□□ 0.89
PIKFYVE-204ENST00000407449 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.88
PIKFYVE-204ENST00000407449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.881e-6■■□□□ 13.1
PIKFYVE-204ENST00000407449 MEGF6O75095 1541 aa20.57■□□□□ 0.88
PIKFYVE-204ENST00000407449 SMARCA5O60264 1052 aaPredicted RBP20.57■□□□□ 0.88
PIKFYVE-204ENST00000407449 SRCIN1Q9C0H9 1055 aa20.57■□□□□ 0.88
PIKFYVE-204ENST00000407449 UBTFL1P0CB47 393 aaPredicted RBP20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 CABLES1Q8TDN4 633 aa20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
PIKFYVE-204ENST00000407449 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
PIKFYVE-204ENST00000407449 APBB1O00213 710 aa20.55■□□□□ 0.88
PIKFYVE-204ENST00000407449 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
PIKFYVE-204ENST00000407449 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
PIKFYVE-204ENST00000407449 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
PIKFYVE-204ENST00000407449 MRC1P22897 1456 aa20.54■□□□□ 0.88
PIKFYVE-204ENST00000407449 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
PIKFYVE-204ENST00000407449 IBTKQ9P2D0 1353 aaPredicted RBP20.54■□□□□ 0.88
PIKFYVE-204ENST00000407449 OSBPL3Q9H4L5 887 aa20.54■□□□□ 0.88
PIKFYVE-204ENST00000407449 ADCY9O60503 1353 aa20.53■□□□□ 0.88
PIKFYVE-204ENST00000407449 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
PIKFYVE-204ENST00000407449 PHKG2P15735 406 aa20.53■□□□□ 0.88
PIKFYVE-204ENST00000407449 C5P01031 1676 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 PI4KAP2A4QPH2 592 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 BEND3Q5T5X7 828 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 PI4KAP1Q8N8J0 262 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 EXOC6BQ9Y2D4 811 aa20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.88
PIKFYVE-204ENST00000407449 CHRNA2Q15822 529 aa20.52■□□□□ 0.87
PIKFYVE-204ENST00000407449 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.87
PIKFYVE-204ENST00000407449 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
PIKFYVE-204ENST00000407449 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
PIKFYVE-204ENST00000407449 ABCA3Q99758 1704 aa20.51■□□□□ 0.87
PIKFYVE-204ENST00000407449 SDSP20132 328 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 HSCBQ8IWL3 235 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 SSH3Q8TE77 659 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 SNX21Q969T3 373 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 ANXA1P04083 346 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms