RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ARHGEF10O15013 1369 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 MBD3O95983 291 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 IGHDP01880 384 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 HOXB7P09629 217 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 NUCB1Q02818 461 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 KRT32Q14532 448 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 C8orf58Q8NAV2 365 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 RBM33Q96EV2 1170 aaKnown RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 PHACTR3Q96KR7 559 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 INO80Q9ULG1 1556 aaPredicted RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 LAMC1P11047 1609 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 PKNOX2Q96KN3 472 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 CNNM1Q9NRU3 951 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 EXOC6BQ9Y2D4 811 aa5.7□□□□□ -1.5
PCDH11X-207ENST00000406881 ERICH2A1L162 156 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 TTC39AQ5SRH9 613 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 PCDHB15Q9Y5E8 787 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 ADGRB3O60242 1522 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 F6X3S4 739 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 TRIM35Q9UPQ4 493 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 AKAP2Q9Y2D5 859 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 LRRFIP2Q9Y608 721 aaKnown RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 NCKAP5LQ9HCH0 1330 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 SETBP1Q9Y6X0 1596 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 CHL1O00533 1208 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 FOXD4L5Q5VV16 416 aaPredicted RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 SMC5Q8IY18 1101 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 FOXD4L4Q8WXT5 416 aaPredicted RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 NAP1L5Q96NT1 182 aaPredicted RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 DNAJC2Q99543 621 aaKnown RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 PHF23Q9BUL5 403 aaPredicted RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 CTNNA3Q9UI47 895 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 METP08581 1390 aa5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 CFAP65Q6ZU64 1925 aaKnown RBP5.69□□□□□ -1.5
PCDH11X-207ENST00000406881 EXOC5O00471 708 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 DHX16O60231 1041 aaKnown RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 MYD88Q99836 296 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 ZBTB40Q9NUA8 1239 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 ZNF652Q9Y2D9 606 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 KIF24Q5T7B8 1368 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 KIAA0232Q92628 1395 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 MADDQ8WXG6 1647 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 A2ML1A8K2U0 1454 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 PI4KAP2A4QPH2 592 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 VPS37CA5D8V6 355 aaPredicted RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 ATP8B2P98198 1209 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 SART3Q15020 963 aaKnown RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 KSR2Q6VAB6 950 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 PI4KAP1Q8N8J0 262 aa5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 ZCRB1Q8TBF4 217 aaKnown RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 SPINK5Q9NQ38 1064 aaPredicted RBP5.68□□□□□ -1.5
PCDH11X-207ENST00000406881 RTL1A6NKG5 1358 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 WDR33Q9C0J8 1336 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 LETM1O95202 739 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 SAFBQ15424 915 aaKnown RBP eCLIP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 MCTP1Q6DN14 999 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 NFXL1Q6ZNB6 911 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 DCAF5Q96JK2 942 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 MPHOSPH8Q99549 860 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 SIL1Q9H173 461 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 MAP3K2Q9Y2U5 619 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 AGLP35573 1532 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 E9PCH4 1651 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 NUTM2BA6NNL0 878 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 NUTM2EB1AL46 878 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 TTC22Q5TAA0 569 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 NUTM2AQ8IVF1 878 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 VSIG10Q8N0Z9 540 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 DCTPP1Q9H773 170 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 ECHDC1Q9NTX5 307 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 ZNF521Q96K83 1311 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 TRAK2O60296 914 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 PTCD1O75127 700 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 BLOC1S2Q6QNY1 142 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 LINS1Q8NG48 757 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 TBC1D32Q96NH3 1257 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 NACAP1Q9BZK3 213 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 PODXL2Q9NZ53 605 aa5.67□□□□□ -1.5
PCDH11X-207ENST00000406881 RNMTO43148 476 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 MSH5O43196 834 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 RLBP1P12271 317 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 MRE11P49959 708 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 PPP1R42Q7Z4L9 355 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 NUTM1Q86Y26 1132 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 TSPYL6Q8N831 410 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 HOOK1Q9UJC3 728 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 A0A087WZG4 1122 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 GOLGA6L19H0YKK7 550 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 SLC3A2P08195 630 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 CHRNA2Q15822 529 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 ANKRD13DQ6ZTN6 518 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 EVI5LQ96CN4 794 aa5.66□□□□□ -1.5
PCDH11X-207ENST00000406881 MEIS3Q99687 375 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms