RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
FAM49A-202ENST00000406434 TFCP2L1Q9NZI6 479 aa13.89□□□□□ -0.19
FAM49A-202ENST00000406434 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
FAM49A-202ENST00000406434 CABP4P57796 275 aa13.88□□□□□ -0.19
FAM49A-202ENST00000406434 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
FAM49A-202ENST00000406434 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
FAM49A-202ENST00000406434 KDRP35968 1356 aa13.88□□□□□ -0.19
FAM49A-202ENST00000406434 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
FAM49A-202ENST00000406434 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
FAM49A-202ENST00000406434 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
FAM49A-202ENST00000406434 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
FAM49A-202ENST00000406434 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
FAM49A-202ENST00000406434 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
FAM49A-202ENST00000406434 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
FAM49A-202ENST00000406434 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
FAM49A-202ENST00000406434 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
FAM49A-202ENST00000406434 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
FAM49A-202ENST00000406434 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
FAM49A-202ENST00000406434 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
FAM49A-202ENST00000406434 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
FAM49A-202ENST00000406434 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
FAM49A-202ENST00000406434 LY75O60449 1722 aa13.85□□□□□ -0.19
FAM49A-202ENST00000406434 LOC102724428A0A0B4J2F2 783 aa13.84□□□□□ -0.19
FAM49A-202ENST00000406434 SIK1P57059 783 aa13.84□□□□□ -0.19
FAM49A-202ENST00000406434 LRP5O75197 1615 aa13.84□□□□□ -0.19
FAM49A-202ENST00000406434 HMGB2P26583 209 aaKnown RBP13.83□□□□□ -0.19
FAM49A-202ENST00000406434 ATP6V1AP38606 617 aa13.83□□□□□ -0.19
FAM49A-202ENST00000406434 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.19
FAM49A-202ENST00000406434 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
FAM49A-202ENST00000406434 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
FAM49A-202ENST00000406434 RNMTO43148 476 aaKnown RBP13.82□□□□□ -0.2
FAM49A-202ENST00000406434 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
FAM49A-202ENST00000406434 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
FAM49A-202ENST00000406434 AK7Q96M32 723 aa13.82□□□□□ -0.2
FAM49A-202ENST00000406434 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
FAM49A-202ENST00000406434 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
FAM49A-202ENST00000406434 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
FAM49A-202ENST00000406434 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
FAM49A-202ENST00000406434 COL23A1Q86Y22 540 aaPredicted RBP13.81□□□□□ -0.2
FAM49A-202ENST00000406434 LINC00116Q8NCU8 138 aa13.81□□□□□ -0.2
FAM49A-202ENST00000406434 PHACTR3Q96KR7 559 aa13.81□□□□□ -0.2
FAM49A-202ENST00000406434 PHF14O94880 888 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 PTGER2P43116 358 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 ITPK1Q13572 414 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 RALBP1Q15311 655 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
FAM49A-202ENST00000406434 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
FAM49A-202ENST00000406434 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
FAM49A-202ENST00000406434 FCHSD2O94868 740 aa13.78□□□□□ -0.2
FAM49A-202ENST00000406434 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
FAM49A-202ENST00000406434 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
FAM49A-202ENST00000406434 C5P01031 1676 aa13.78□□□□□ -0.2
FAM49A-202ENST00000406434 GNPATO15228 680 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 NEFMP07197 916 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 POLD1P28340 1107 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 ARXQ96QS3 562 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 TUBGCP6Q96RT7 1819 aa13.77□□□□□ -0.21
FAM49A-202ENST00000406434 TEFQ10587 303 aa13.76□□□□□ -0.21
FAM49A-202ENST00000406434 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
FAM49A-202ENST00000406434 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
FAM49A-202ENST00000406434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.75□□□□□ -0.21
FAM49A-202ENST00000406434 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 C4BP0C0L5 1744 aa13.75□□□□□ -0.21
FAM49A-202ENST00000406434 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
FAM49A-202ENST00000406434 RTCBQ9Y3I0 505 aaKnown RBP13.74□□□□□ -0.21
FAM49A-202ENST00000406434 QSER1Q2KHR3 1735 aa13.74□□□□□ -0.21
FAM49A-202ENST00000406434 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
FAM49A-202ENST00000406434 SSFA2P28290 1259 aa13.73□□□□□ -0.21
FAM49A-202ENST00000406434 TRAPPC3LQ5T215 181 aa13.73□□□□□ -0.21
FAM49A-202ENST00000406434 FHDC1Q9C0D6 1143 aaPredicted RBP13.73□□□□□ -0.21
FAM49A-202ENST00000406434 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
FAM49A-202ENST00000406434 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
FAM49A-202ENST00000406434 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
FAM49A-202ENST00000406434 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
FAM49A-202ENST00000406434 MCM10Q7L590 875 aa13.72□□□□□ -0.21
FAM49A-202ENST00000406434 DNAJC10Q8IXB1 793 aa13.72□□□□□ -0.21
FAM49A-202ENST00000406434 TTC5Q8N0Z6 440 aa13.72□□□□□ -0.21
FAM49A-202ENST00000406434 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
FAM49A-202ENST00000406434 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
FAM49A-202ENST00000406434 SYT17Q9BSW7 474 aa13.71□□□□□ -0.21
FAM49A-202ENST00000406434 BTBD11A6QL63 1104 aa13.71□□□□□ -0.22
FAM49A-202ENST00000406434 RPS6KA4O75676 772 aa13.71□□□□□ -0.22
FAM49A-202ENST00000406434 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.22
FAM49A-202ENST00000406434 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
FAM49A-202ENST00000406434 CNTNAP4Q9C0A0 1308 aa13.7□□□□□ -0.22
FAM49A-202ENST00000406434 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
FAM49A-202ENST00000406434 RFC4P35249 363 aa13.7□□□□□ -0.22
FAM49A-202ENST00000406434 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms