RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 CGNQ9P2M7 1197 aaKnown RBP15.64■□□□□ 0.09
SNED1-205ENST00000405547 GOLGA6L7A0A1B0GV03 622 aa15.64■□□□□ 0.09
SNED1-205ENST00000405547 TBC1D9Q6ZT07 1266 aa15.64■□□□□ 0.09
SNED1-205ENST00000405547 HMGB1P09429 215 aaKnown RBP15.64■□□□□ 0.09
SNED1-205ENST00000405547 BAG4O95429 457 aaKnown RBP15.64■□□□□ 0.09
SNED1-205ENST00000405547 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
SNED1-205ENST00000405547 CCDC83Q8IWF9 413 aa15.64■□□□□ 0.09
SNED1-205ENST00000405547 RALGAPBQ86X10 1494 aa15.64■□□□□ 0.09
SNED1-205ENST00000405547 CAMK4Q16566 473 aa15.63■□□□□ 0.09
SNED1-205ENST00000405547 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
SNED1-205ENST00000405547 IMMTQ16891 758 aaKnown RBP15.63■□□□□ 0.09
SNED1-205ENST00000405547 SKAP1Q86WV1 359 aa15.63■□□□□ 0.09
SNED1-205ENST00000405547 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
SNED1-205ENST00000405547 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 MCM3P25205 808 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 IL16Q14005 1332 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 MYL6BP14649 208 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 GSDMDP57764 484 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 KRT18P05783 430 aaKnown RBP15.62■□□□□ 0.09
SNED1-205ENST00000405547 HDAC1Q13547 482 aaPredicted RBP15.62■□□□□ 0.09
SNED1-205ENST00000405547 UVSSAQ2YD98 709 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
SNED1-205ENST00000405547 UBE2HP62256 183 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 CCDC148Q8NFR7 591 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 PRIMPOLQ96LW4 560 aa15.62■□□□□ 0.09
SNED1-205ENST00000405547 CABP4P57796 275 aa15.61■□□□□ 0.09
SNED1-205ENST00000405547 CLIP2Q9UDT6 1046 aa15.61■□□□□ 0.09
SNED1-205ENST00000405547 CLCN1P35523 988 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 KIAA1328Q86T90 577 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 MTMR7Q9Y216 660 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
SNED1-205ENST00000405547 CCDC102AQ96A19 550 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 UBAC1Q9BSL1 405 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 LRRFIP2Q9Y608 721 aaKnown RBP15.6■□□□□ 0.09
SNED1-205ENST00000405547 SKIDA1Q1XH10 827 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 DDX11Q96FC9 970 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 CRACR2AQ9BSW2 395 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 TNNT1P13805 278 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 IKQ13123 557 aaPredicted RBP15.6■□□□□ 0.09
SNED1-205ENST00000405547 CALCOCO1Q9P1Z2 691 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
SNED1-205ENST00000405547 SMARCA5O60264 1052 aaPredicted RBP15.59■□□□□ 0.09
SNED1-205ENST00000405547 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 MPHOSPH8Q99549 860 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 ERICH4A6NGS2 130 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 KIF5CO60282 957 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 ADCY5O95622 1261 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
SNED1-205ENST00000405547 IGHDP01880 384 aa15.58■□□□□ 0.09
SNED1-205ENST00000405547 CASQ1P31415 396 aa15.58■□□□□ 0.09
SNED1-205ENST00000405547 CBX1P83916 185 aa15.58■□□□□ 0.09
SNED1-205ENST00000405547 STX6O43752 255 aa15.58■□□□□ 0.08
SNED1-205ENST00000405547 PRPF40BQ6NWY9 871 aaKnown RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 TDO2P48775 406 aa15.58■□□□□ 0.08
SNED1-205ENST00000405547 NUCB1Q02818 461 aa15.58■□□□□ 0.08
SNED1-205ENST00000405547 THEMISQ8N1K5 641 aaPredicted RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 PAXBP1Q9Y5B6 917 aa15.58■□□□□ 0.08
SNED1-205ENST00000405547 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
SNED1-205ENST00000405547 CCDC196A0A1B0GTZ2 297 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 TOP1P11387 765 aaKnown RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 C8orf76Q96K31 380 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 LARP1Q6PKG0 1096 aaKnown RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 TANGO6Q9C0B7 1094 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 EIF5P55010 431 aaKnown RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 ZRSR2Q15696 482 aaKnown RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 ZSCAN23Q3MJ62 389 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 C16orf45Q96MC5 204 aaPredicted RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 CENPHQ9H3R5 247 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
SNED1-205ENST00000405547 MCM10Q7L590 875 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
SNED1-205ENST00000405547 LRSAM1Q6UWE0 723 aa15.56■□□□□ 0.08
SNED1-205ENST00000405547 STX1AQ16623 288 aa15.56■□□□□ 0.08
SNED1-205ENST00000405547 SNX21Q969T3 373 aa15.56■□□□□ 0.08
SNED1-205ENST00000405547 GOLGA6L9A6NEM1 432 aa15.56■□□□□ 0.08
SNED1-205ENST00000405547 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
SNED1-205ENST00000405547 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
SNED1-205ENST00000405547 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
SNED1-205ENST00000405547 TTC22Q5TAA0 569 aa15.55■□□□□ 0.08
SNED1-205ENST00000405547 EVI5LQ96CN4 794 aa15.55■□□□□ 0.08
SNED1-205ENST00000405547 DISP3Q9P2K9 1392 aa15.55■□□□□ 0.08
SNED1-205ENST00000405547 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
SNED1-205ENST00000405547 RAPGEF6Q8TEU7 1601 aa15.55■□□□□ 0.08
SNED1-205ENST00000405547 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 NEFHP12036 1026 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 ARHGAP45Q92619 1136 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 FAM193AP78312 1265 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 ZNF165P49910 485 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
SNED1-205ENST00000405547 FAM107BQ9H098 131 aa15.53■□□□□ 0.08
SNED1-205ENST00000405547 CKAP2LQ8IYA6 745 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms