RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MYD88Q99836 296 aa14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 C6orf229H3BNL8 230 aa14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 CTNNA3Q9UI47 895 aa14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 ATP2B2Q01814 1243 aa14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 TTLL12Q14166 644 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF3-204ENST00000405493 LDHCP07864 332 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 SIL1Q9H173 461 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 CCAR2Q8N163 923 aaKnown RBP14□□□□□ -0.17
RAPGEF3-204ENST00000405493 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 ACSBG1Q96GR2 724 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-204ENST00000405493 PCMTD1Q96MG8 357 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-204ENST00000405493 EIF2AK4Q9P2K8 1649 aaKnown RBP14□□□□□ -0.17
RAPGEF3-204ENST00000405493 NPATQ14207 1427 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 ZNF592Q92610 1267 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
RAPGEF3-204ENST00000405493 MYO1BO43795 1136 aa13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 ALDH1L2Q3SY69 923 aa13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 PKNOX2Q96KN3 472 aa13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 NPHP4O75161 1426 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 DNAAF4Q8WXU2 420 aa13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF3-204ENST00000405493 KDM4AO75164 1064 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 MTERF4Q7Z6M4 381 aaKnown RBP13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 IP6K1Q92551 441 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 ABCC1P33527 1531 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 SASS6Q6UVJ0 657 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 CRACR2BQ8N4Y2 399 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 HDAC9Q9UKV0 1011 aa13.98□□□□□ -0.17
RAPGEF3-204ENST00000405493 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 AACSQ86V21 672 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 SPTY2D1Q68D10 685 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 TPTE2Q6XPS3 522 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
RAPGEF3-204ENST00000405493 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
RAPGEF3-204ENST00000405493 ZBTB3Q9H5J0 574 aa13.96□□□□□ -0.17
RAPGEF3-204ENST00000405493 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
RAPGEF3-204ENST00000405493 TDO2P48775 406 aa13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 ABCF2Q9UG63 623 aa13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 ADGRL2O95490 1459 aa13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 NLRP1Q9C000 1473 aa13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 CHD1O14646 1710 aa13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.96□□□□□ -0.18
RAPGEF3-204ENST00000405493 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 ABCA8O94911 1581 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC73Q6ZRK6 1079 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 MIS18AQ9NYP9 233 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 MAP3K12Q12852 859 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 PTPRCP08575 1304 aa13.95□□□□□ -0.18
RAPGEF3-204ENST00000405493 USP5P45974 858 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 ZNF771Q7L3S4 317 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 FLAD1Q8NFF5 587 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 CFAP43Q8NDM7 1665 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 GPTP24298 496 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 NF2P35240 595 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 KDM6BO15054 1643 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCDC173Q0VFZ6 552 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 ORAI2Q96SN7 254 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 PRM3Q9NNZ6 103 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 MAP4K4O95819 1239 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 IL16Q14005 1332 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 EYA3Q99504 573 aa13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-204ENST00000405493 NEK4P51957 841 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 PLEKHG1Q9ULL1 1385 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
RAPGEF3-204ENST00000405493 OGFOD1Q8N543 542 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms