RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 NEMFO60524 1076 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 GJB2P29033 226 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 DDX19AQ9NUU7 478 aaKnown RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 GABPB1Q06547 395 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 PDLIM2Q96JY6 352 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 FSD1Q9BTV5 496 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 MRC2Q9UBG0 1479 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 BRD1O95696 1058 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 ME1P48163 572 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 DNM1Q05193 864 aaKnown RBP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 G3BP1Q13283 466 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 ANKRD1Q15327 319 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 PDILTQ8N807 584 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 CCDC34Q96HJ3 373 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 CDK19Q9BWU1 502 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 TRIM35Q9UPQ4 493 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 WDR7Q9Y4E6 1490 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 VGLL3A8MV65 326 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 F13A1P00488 732 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 SFPQP23246 707 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 PRPF40BQ6NWY9 871 aaKnown RBP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 CREBRFQ8IUR6 639 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 GSPT1P15170 499 aaKnown RBP8.73□□□□□ -1.01
HDAC9-202ENST00000405010 ANO6Q4KMQ2 910 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 C8orf58Q8NAV2 365 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 CCDC171Q6TFL3 1326 aa8.73□□□□□ -1.01
HDAC9-202ENST00000405010 ACBD3Q9H3P7 528 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SRGAP3O43295 1099 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 POLR1AO95602 1720 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 TYRO3Q06418 890 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SYNE3Q6ZMZ3 975 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 PLCD3Q8N3E9 789 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 FAM83GA6ND36 823 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 URI1O94763 535 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SKILP12757 684 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 DHX8Q14562 1220 aaKnown RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 CEP85Q6P2H3 762 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 MCM10Q7L590 875 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 DACT1Q9NYF0 836 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 CPLX1O14810 134 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 RAB11FIP3O75154 756 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 MLECQ14165 292 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 LUZP1Q86V48 1076 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 ZNF396Q96N95 335 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-202ENST00000405010 MIS18AQ9NYP9 233 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 GRIN2AQ12879 1464 aa8.72□□□□□ -1.01
HDAC9-202ENST00000405010 SYT1P21579 422 aa8.71□□□□□ -1.01
HDAC9-202ENST00000405010 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.01
HDAC9-202ENST00000405010 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.01
HDAC9-202ENST00000405010 TPM1P09493 284 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.02
HDAC9-202ENST00000405010 STK38Q15208 465 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 EMILIN1Q9Y6C2 1016 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 NOS1P29475 1434 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 HIP1O00291 1037 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 SLU7O95391 586 aaKnown RBP8.71□□□□□ -1.02
HDAC9-202ENST00000405010 SERPINC1P01008 464 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 FBLN1P23142 703 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 DDX11Q96FC9 970 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 C14orf93Q9H972 538 aaKnown RBP8.71□□□□□ -1.02
HDAC9-202ENST00000405010 ANO10Q9NW15 660 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 PTPRCP08575 1304 aa8.71□□□□□ -1.02
HDAC9-202ENST00000405010 FYB1O15117 783 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 LMOD2Q6P5Q4 547 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 NGDNQ8NEJ9 315 aaKnown RBP8.7□□□□□ -1.02
HDAC9-202ENST00000405010 NSFL1CQ9UNZ2 370 aaKnown RBP8.7□□□□□ -1.02
HDAC9-202ENST00000405010 RPGRIP1LQ68CZ1 1315 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 CAVIN2O95810 425 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
HDAC9-202ENST00000405010 DNAJC25Q9H1X3 360 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 ATP10BO94823 1461 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 GLRX3O76003 335 aaKnown RBP8.7□□□□□ -1.02
HDAC9-202ENST00000405010 TEFQ10587 303 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 OLFM4Q6UX06 510 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 NECAB1Q8N987 351 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 ADGBQ8N7X0 1667 aa8.7□□□□□ -1.02
HDAC9-202ENST00000405010 GSDMDP57764 484 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 LRRFIP2Q9Y608 721 aaKnown RBP8.69□□□□□ -1.02
HDAC9-202ENST00000405010 CLEC17AQ6ZS10 378 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-202ENST00000405010 CHMLP26374 656 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 AK2P54819 239 aa8.69□□□□□ -1.02
HDAC9-202ENST00000405010 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
HDAC9-202ENST00000405010 PYCARDQ9ULZ3 195 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms