RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 RNF17Q9BXT8 1623 aaKnown RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 TAF3Q5VWG9 929 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 A2ML1A8K2U0 1454 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 TEX35Q5T0J7 233 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 ERC2O15083 957 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 ZNF445P59923 1031 aa9.66□□□□□ -0.86
LTBP1-202ENST00000404525 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
LTBP1-202ENST00000404525 G3V3G9 751 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 FYB1O15117 783 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 CABP4P57796 275 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.86
LTBP1-202ENST00000404525 AMOTQ4VCS5 1084 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 BMP2KLQ5H9B9 411 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
LTBP1-202ENST00000404525 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
LTBP1-202ENST00000404525 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.86
LTBP1-202ENST00000404525 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 PIK3R4Q99570 1358 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 PLA2R1Q13018 1463 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
LTBP1-202ENST00000404525 LETM1O95202 739 aaPredicted RBP9.65□□□□□ -0.87
LTBP1-202ENST00000404525 TRDNQ13061 729 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 NFE2L2Q16236 605 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 PPP4R3BQ5MIZ7 849 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 CCDC73Q6ZRK6 1079 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 PDCL2Q8N4E4 241 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 ZNF592Q92610 1267 aa9.65□□□□□ -0.87
LTBP1-202ENST00000404525 APPP05067 770 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 ZFYVE9O95405 1425 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 LRSAM1Q6UWE0 723 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 VPS37CA5D8V6 355 aaPredicted RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 TRIM27P14373 513 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 HMGB2P26583 209 aaKnown RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
LTBP1-202ENST00000404525 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
LTBP1-202ENST00000404525 ADGRB3O60242 1522 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 MCM2P49736 904 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 NUCB1Q02818 461 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 CCDC30Q5VVM6 783 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 ARGLU1Q9NWB6 273 aaPredicted RBP9.63□□□□□ -0.87
LTBP1-202ENST00000404525 PDE4CQ08493 712 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
LTBP1-202ENST00000404525 E9PCH4 1651 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 UTP14CQ5TAP6 766 aaKnown RBP9.63□□□□□ -0.87
LTBP1-202ENST00000404525 MPNDQ8N594 471 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 METP08581 1390 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 KIF20AO95235 890 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
LTBP1-202ENST00000404525 EDC4Q6P2E9 1401 aaKnown RBP9.62□□□□□ -0.87
LTBP1-202ENST00000404525 DMTNQ08495 405 aa9.62□□□□□ -0.87
LTBP1-202ENST00000404525 TMPOP42166 694 aaKnown RBP9.62□□□□□ -0.87
LTBP1-202ENST00000404525 VPS53Q5VIR6 699 aa9.62□□□□□ -0.87
LTBP1-202ENST00000404525 SYNMO15061 1565 aa9.62□□□□□ -0.87
LTBP1-202ENST00000404525 SSH1Q8WYL5 1049 aa9.62□□□□□ -0.87
LTBP1-202ENST00000404525 RBM42Q9BTD8 480 aaKnown RBP9.62□□□□□ -0.87
LTBP1-202ENST00000404525 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
LTBP1-202ENST00000404525 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 PPRC1Q5VV67 1664 aaKnown RBP9.61□□□□□ -0.87
LTBP1-202ENST00000404525 AMOTL1Q8IY63 956 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 ACBD3Q9H3P7 528 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
LTBP1-202ENST00000404525 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 SF3B2Q13435 895 aaKnown RBP9.61□□□□□ -0.87
LTBP1-202ENST00000404525 TWISTNBQ3B726 338 aaPredicted RBP9.61□□□□□ -0.87
LTBP1-202ENST00000404525 MYRIPQ8NFW9 859 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 SLAIN2Q9P270 581 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 SAFBQ15424 915 aaKnown RBP eCLIP9.61□□□□□ -0.87
LTBP1-202ENST00000404525 PRDM4Q9UKN5 801 aa9.61□□□□□ -0.87
LTBP1-202ENST00000404525 MNS1Q8NEH6 495 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
LTBP1-202ENST00000404525 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 GNAI3P08754 354 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 IFT57Q9NWB7 429 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 UBTFL1P0CB47 393 aaPredicted RBP9.6□□□□□ -0.87
LTBP1-202ENST00000404525 PDCP20941 246 aa9.6□□□□□ -0.87
LTBP1-202ENST00000404525 PSMA5P28066 241 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms