RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 MPRIPQ6WCQ1 1025 aa13.25□□□□□ -0.29
NUP43-204ENST00000403890 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
NUP43-204ENST00000403890 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
NUP43-204ENST00000403890 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
NUP43-204ENST00000403890 C5P01031 1676 aa13.24□□□□□ -0.29
NUP43-204ENST00000403890 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
NUP43-204ENST00000403890 SLC34A2O95436 690 aa13.24□□□□□ -0.29
NUP43-204ENST00000403890 SSFA2P28290 1259 aa13.24□□□□□ -0.29
NUP43-204ENST00000403890 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
NUP43-204ENST00000403890 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 MMP10P09238 476 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 HOXC9P31274 260 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 AMPHP49418 695 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 C9orf131Q5VYM1 1079 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 MEGF6O75095 1541 aa13.23□□□□□ -0.29
NUP43-204ENST00000403890 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
NUP43-204ENST00000403890 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
NUP43-204ENST00000403890 FCHSD2O94868 740 aa13.22□□□□□ -0.29
NUP43-204ENST00000403890 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
NUP43-204ENST00000403890 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
NUP43-204ENST00000403890 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
NUP43-204ENST00000403890 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 RRAGCQ9HB90 399 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
NUP43-204ENST00000403890 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
NUP43-204ENST00000403890 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
NUP43-204ENST00000403890 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
NUP43-204ENST00000403890 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
NUP43-204ENST00000403890 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
NUP43-204ENST00000403890 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
NUP43-204ENST00000403890 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
NUP43-204ENST00000403890 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
NUP43-204ENST00000403890 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
NUP43-204ENST00000403890 DPEP1P16444 411 aa13.19□□□□□ -0.3
NUP43-204ENST00000403890 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 GNPATO15228 680 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 FBLN1P23142 703 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 SIK1P57059 783 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 PIGBQ92521 554 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 COG3Q96JB2 828 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
NUP43-204ENST00000403890 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
NUP43-204ENST00000403890 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
NUP43-204ENST00000403890 TMF1P82094 1093 aa13.17□□□□□ -0.3
NUP43-204ENST00000403890 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
NUP43-204ENST00000403890 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
NUP43-204ENST00000403890 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
NUP43-204ENST00000403890 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
NUP43-204ENST00000403890 CYP27B1O15528 508 aa13.16□□□□□ -0.3
NUP43-204ENST00000403890 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
NUP43-204ENST00000403890 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
NUP43-204ENST00000403890 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
NUP43-204ENST00000403890 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 KCNA3P22001 575 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
NUP43-204ENST00000403890 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
NUP43-204ENST00000403890 C7P10643 843 aa13.13□□□□□ -0.31
NUP43-204ENST00000403890 ITPK1Q13572 414 aa13.13□□□□□ -0.31
NUP43-204ENST00000403890 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
NUP43-204ENST00000403890 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
NUP43-204ENST00000403890 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
NUP43-204ENST00000403890 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
NUP43-204ENST00000403890 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
NUP43-204ENST00000403890 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
NUP43-204ENST00000403890 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
NUP43-204ENST00000403890 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
NUP43-204ENST00000403890 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
NUP43-204ENST00000403890 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
NUP43-204ENST00000403890 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
NUP43-204ENST00000403890 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
NUP43-204ENST00000403890 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
NUP43-204ENST00000403890 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
NUP43-204ENST00000403890 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
NUP43-204ENST00000403890 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
NUP43-204ENST00000403890 GYS1P13807 737 aa13.1□□□□□ -0.31
NUP43-204ENST00000403890 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
NUP43-204ENST00000403890 ITGB4P16144 1822 aa13.09□□□□□ -0.31
NUP43-204ENST00000403890 RFC4P35249 363 aa13.09□□□□□ -0.31
NUP43-204ENST00000403890 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
NUP43-204ENST00000403890 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
NUP43-204ENST00000403890 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
NUP43-204ENST00000403890 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
NUP43-204ENST00000403890 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
NUP43-204ENST00000403890 MIER1Q8N108 512 aa13.08□□□□□ -0.32
NUP43-204ENST00000403890 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
NUP43-204ENST00000403890 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
NUP43-204ENST00000403890 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms