RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SCG3Q8WXD2 468 aaKnown RBP6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 TSPAN10Q9H1Z9 355 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 IL2RAP01589 272 aa6.8□□□□□ -1.32
HMGB1P17-201ENST00000403495 NAA30Q147X3 362 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P17-201ENST00000403495 CYP2U1Q7Z449 544 aa6.8□□□□□ -1.32
HMGB1P17-201ENST00000403495 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P17-201ENST00000403495 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
HMGB1P17-201ENST00000403495 TTC24A2A3L6 582 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 SOWAHDA6NJG2 315 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 C21orf2O43822 256 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 EPHA4P54764 986 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 CCDC27Q2M243 656 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 TAS1R3Q7RTX0 852 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 EMILIN1Q9Y6C2 1016 aa6.79□□□□□ -1.32
HMGB1P17-201ENST00000403495 M0R2N6 131 aa6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 GDF9O60383 454 aa6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 WDR4P57081 412 aaKnown RBP6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 RELBQ01201 579 aa6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 SNIP1Q8TAD8 396 aaKnown RBP6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 BIN2Q9UBW5 565 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P17-201ENST00000403495 A0A1W2PRU2 124 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 H3BRB1 525 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 GNRH1P01148 92 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 ADH1AP07327 375 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 TRIM67Q6ZTA4 783 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 SLC9A9Q8IVB4 645 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 C1orf216Q8TAB5 229 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 KLF16Q9BXK1 252 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 TUT1Q9H6E5 874 aaKnown RBP6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 ATAD2Q6PL18 1390 aa6.77□□□□□ -1.33
HMGB1P17-201ENST00000403495 MEN1O00255 615 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 BACH1O14867 736 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 TIMP2P16035 220 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 SMPD1P17405 629 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 TLR1Q15399 786 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 HPS1Q92902 700 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 CNKSR1Q969H4 720 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
HMGB1P17-201ENST00000403495 A6NJY4 79 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 WASLO00401 505 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 PPP1R12BO60237 982 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 IGFBP4P22692 258 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 SMTNP53814 917 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 XAGE2Q96GT9 111 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 TOR4AQ9NXH8 423 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 V9GY48 417 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P17-201ENST00000403495 PTGIRP43119 386 aa6.74□□□□□ -1.33
HMGB1P17-201ENST00000403495 FOXK2Q01167 660 aa6.74□□□□□ -1.33
HMGB1P17-201ENST00000403495 NOM1Q5C9Z4 860 aaKnown RBP6.74□□□□□ -1.33
HMGB1P17-201ENST00000403495 ESCO1Q5FWF5 840 aa6.74□□□□□ -1.33
HMGB1P17-201ENST00000403495 Q6ZVU0 165 aa6.74□□□□□ -1.33
HMGB1P17-201ENST00000403495 GLYCTKQ8IVS8 523 aa6.73□□□□□ -1.33
HMGB1P17-201ENST00000403495 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
HMGB1P17-201ENST00000403495 ESYT1Q9BSJ8 1104 aa6.73□□□□□ -1.33
HMGB1P17-201ENST00000403495 HRH3Q9Y5N1 445 aa6.73□□□□□ -1.33
HMGB1P17-201ENST00000403495 FOXO3O43524 673 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 ICMTO60725 284 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 RBM25P49756 843 aaKnown RBP6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 CENPCQ03188 943 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 CLN3Q13286 438 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 MTFR1Q15390 333 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 ZDHHC1Q8WTX9 485 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 VTI1AQ96AJ9 217 aa6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 FHDC1Q9C0D6 1143 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 IQSEC3Q9UPP2 1182 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P17-201ENST00000403495 ECM1Q16610 540 aa6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 NLRP3Q96P20 1036 aa6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 INSM2Q96T92 566 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 CABP1Q9NZU7 370 aa6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 HCN4Q9Y3Q4 1203 aa6.71□□□□□ -1.34
HMGB1P17-201ENST00000403495 PTCD1O75127 700 aaKnown RBP6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 MPSTP25325 297 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 MARSP56192 900 aaKnown RBP6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 FAM26DQ5JW98 314 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 DNAJC14Q6Y2X3 702 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 MEIOBQ8N635 442 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 QTRT2Q9H974 415 aaKnown RBP6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 EGFL7Q9UHF1 273 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 ZNF232Q9UNY5 417 aa6.7□□□□□ -1.34
HMGB1P17-201ENST00000403495 CDK2AP1O14519 115 aa6.69□□□□□ -1.34
HMGB1P17-201ENST00000403495 COX20Q5RI15 118 aa6.69□□□□□ -1.34
HMGB1P17-201ENST00000403495 HELQQ8TDG4 1101 aa6.69□□□□□ -1.34
HMGB1P17-201ENST00000403495 LRFN2Q9ULH4 789 aa6.69□□□□□ -1.34
HMGB1P17-201ENST00000403495 EML1O00423 815 aa6.68□□□□□ -1.34
HMGB1P17-201ENST00000403495 CTSOP43234 321 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms