RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 RGS3P49796 1198 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 EVA1CP58658 441 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 DEFB132Q7Z7B7 95 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 MARF1Q9Y4F3 1742 aaKnown RBP7.91□□□□□ -1.14
CLIP4-202ENST00000401605 ALS2Q96Q42 1657 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 EP400Q96L91 3159 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 MAFGO15525 162 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 OS9Q13438 667 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-202ENST00000401605 RGPD8O14715 1765 aaPredicted RBP7.91□□□□□ -1.14
CLIP4-202ENST00000401605 NWD2Q9ULI1 1742 aa7.9□□□□□ -1.14
CLIP4-202ENST00000401605 BAG6P46379 1132 aa7.9□□□□□ -1.14
CLIP4-202ENST00000401605 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
CLIP4-202ENST00000401605 USP6P35125 1406 aa7.9□□□□□ -1.14
CLIP4-202ENST00000401605 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.15
CLIP4-202ENST00000401605 NLRP6P59044 892 aa7.9□□□□□ -1.15
CLIP4-202ENST00000401605 KCNA1Q09470 495 aa7.9□□□□□ -1.15
CLIP4-202ENST00000401605 COL14A1Q05707 1796 aaKnown RBP7.89□□□□□ -1.15
CLIP4-202ENST00000401605 BRD1O95696 1058 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-202ENST00000401605 SSH2Q76I76 1423 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 PLCH1Q4KWH8 1693 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 ABCA3Q99758 1704 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 LARP1Q6PKG0 1096 aaKnown RBP7.89□□□□□ -1.15
CLIP4-202ENST00000401605 TCP11L2Q8N4U5 519 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 HDAC5Q9UQL6 1122 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 THRAP3Q9Y2W1 955 aaKnown RBP7.89□□□□□ -1.15
CLIP4-202ENST00000401605 IVNS1ABPQ9Y6Y0 642 aa7.89□□□□□ -1.15
CLIP4-202ENST00000401605 IRF6O14896 467 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 MFSD10Q14728 455 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 FAM196AQ6ZSG2 479 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 ZNF830Q96NB3 372 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-202ENST00000401605 CARD11Q9BXL7 1154 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 ITSN1Q15811 1721 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 TONSLQ96HA7 1378 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 SBNO2Q9Y2G9 1366 aa7.88□□□□□ -1.15
CLIP4-202ENST00000401605 APPP05067 770 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 MAP2K5Q13163 448 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 PDE3BQ13370 1112 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 CAMK2BQ13554 666 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 NOP58Q9Y2X3 529 aaKnown RBP7.87□□□□□ -1.15
CLIP4-202ENST00000401605 MNX1P50219 401 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-202ENST00000401605 KCNH5Q8NCM2 988 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 TOPAZ1Q8N9V7 1692 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 TTC21BQ7Z4L5 1316 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 TTC21AQ8NDW8 1320 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 AATKQ6ZMQ8 1374 aa7.87□□□□□ -1.15
CLIP4-202ENST00000401605 SND1Q7KZF4 910 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLIP4-202ENST00000401605 FBXO22Q8NEZ5 403 aa7.86□□□□□ -1.15
CLIP4-202ENST00000401605 DDX27Q96GQ7 796 aaKnown RBP7.86□□□□□ -1.15
CLIP4-202ENST00000401605 NRAPQ86VF7 1730 aa7.86□□□□□ -1.15
CLIP4-202ENST00000401605 EN1Q05925 392 aaPredicted RBP7.86□□□□□ -1.15
CLIP4-202ENST00000401605 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
CLIP4-202ENST00000401605 CAMTA1Q9Y6Y1 1673 aa7.86□□□□□ -1.15
CLIP4-202ENST00000401605 DISP2A7MBM2 1401 aa7.86□□□□□ -1.15
CLIP4-202ENST00000401605 NRKQ7Z2Y5 1582 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 SMARCA5O60264 1052 aaPredicted RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 OXER1Q8TDS5 423 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 PDCL3Q9H2J4 239 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 CPSF1Q10570 1443 aaKnown RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 COL5A2P05997 1499 aaPredicted RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 TRIM37O94972 964 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 FECHP22830 423 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 GIGYF2Q6Y7W6 1299 aaKnown RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 ARHGEF25Q86VW2 580 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 REPIN1Q9BWE0 567 aaKnown RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 KIAA1522Q9P206 1035 aaPredicted RBP7.85□□□□□ -1.15
CLIP4-202ENST00000401605 CRYBG1Q9Y4K1 1723 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 CRB1P82279 1406 aa7.85□□□□□ -1.15
CLIP4-202ENST00000401605 TRPM1Q7Z4N2 1603 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 TOM1L2Q6ZVM7 507 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 TRIM44Q96DX7 344 aaPredicted RBP7.84□□□□□ -1.15
CLIP4-202ENST00000401605 TMEM51Q9NW97 253 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.15
CLIP4-202ENST00000401605 SLIT3O75094 1523 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.15
CLIP4-202ENST00000401605 THSD7AQ9UPZ6 1657 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 APBA3O96018 575 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.15
CLIP4-202ENST00000401605 CRISPLD2Q9H0B8 497 aa7.84□□□□□ -1.15
CLIP4-202ENST00000401605 PARD3Q8TEW0 1356 aa7.84□□□□□ -1.16
CLIP4-202ENST00000401605 SOX12O15370 315 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
CLIP4-202ENST00000401605 WDR17Q8IZU2 1322 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 CAMKK2Q96RR4 588 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
CLIP4-202ENST00000401605 QRICH2Q9H0J4 1663 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 AXIN2Q9Y2T1 843 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.83□□□□□ -1.16
CLIP4-202ENST00000401605 EZH2Q15910 746 aaKnown RBP7.83□□□□□ -1.16
CLIP4-202ENST00000401605 SH3D19Q5HYK7 790 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLIP4-202ENST00000401605 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
CLIP4-202ENST00000401605 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
CLIP4-202ENST00000401605 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
CLIP4-202ENST00000401605 PDE4AP27815 886 aa7.82□□□□□ -1.16
CLIP4-202ENST00000401605 DDB1Q16531 1140 aa7.82□□□□□ -1.16
CLIP4-202ENST00000401605 CEP120Q8N960 986 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms