RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 OVOS2A0A0G2JMS6 1433 aa13.37□□□□□ -0.27
LINC00649-202ENST00000400353 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
LINC00649-202ENST00000400353 CDC45O75419 566 aa13.36□□□□□ -0.27
LINC00649-202ENST00000400353 GNAI3P08754 354 aa13.36□□□□□ -0.27
LINC00649-202ENST00000400353 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-202ENST00000400353 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
LINC00649-202ENST00000400353 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 FLIIQ13045 1269 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 MEIS3Q99687 375 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 G2E3Q7L622 706 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 PLEKHM2Q8IWE5 1019 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
LINC00649-202ENST00000400353 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 C1orf167Q5SNV9 1468 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 GCP02774 474 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 GNAI2P04899 355 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 DCCP43146 1447 aa13.34□□□□□ -0.27
LINC00649-202ENST00000400353 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.27
LINC00649-202ENST00000400353 TTC22Q5TAA0 569 aa13.33□□□□□ -0.27
LINC00649-202ENST00000400353 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.27
LINC00649-202ENST00000400353 SNX21Q969T3 373 aa13.33□□□□□ -0.27
LINC00649-202ENST00000400353 FKBP5Q13451 457 aaPredicted RBP13.33□□□□□ -0.28
LINC00649-202ENST00000400353 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
LINC00649-202ENST00000400353 KRT28Q7Z3Y7 464 aa13.33□□□□□ -0.28
LINC00649-202ENST00000400353 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
LINC00649-202ENST00000400353 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
LINC00649-202ENST00000400353 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
LINC00649-202ENST00000400353 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
LINC00649-202ENST00000400353 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
LINC00649-202ENST00000400353 F6X3S4 739 aa13.31□□□□□ -0.28
LINC00649-202ENST00000400353 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
LINC00649-202ENST00000400353 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
LINC00649-202ENST00000400353 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
LINC00649-202ENST00000400353 TEFQ10587 303 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 ABCC6O95255 1503 aa13.3□□□□□ -0.28
LINC00649-202ENST00000400353 GSPT1P15170 499 aaKnown RBP13.29□□□□□ -0.28
LINC00649-202ENST00000400353 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
LINC00649-202ENST00000400353 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
LINC00649-202ENST00000400353 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
LINC00649-202ENST00000400353 SLKQ9H2G2 1235 aaPredicted RBP13.28□□□□□ -0.28
LINC00649-202ENST00000400353 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
LINC00649-202ENST00000400353 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
LINC00649-202ENST00000400353 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
LINC00649-202ENST00000400353 ATF3P18847 181 aa13.28□□□□□ -0.28
LINC00649-202ENST00000400353 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
LINC00649-202ENST00000400353 BTBD11A6QL63 1104 aa13.27□□□□□ -0.28
LINC00649-202ENST00000400353 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.28
LINC00649-202ENST00000400353 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.28
LINC00649-202ENST00000400353 GSE1Q14687 1217 aa13.27□□□□□ -0.29
LINC00649-202ENST00000400353 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
LINC00649-202ENST00000400353 ADAMTS7Q9UKP4 1686 aa13.26□□□□□ -0.29
LINC00649-202ENST00000400353 UBTFL1P0CB47 393 aaPredicted RBP13.26□□□□□ -0.29
LINC00649-202ENST00000400353 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
LINC00649-202ENST00000400353 XPCQ01831 940 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-202ENST00000400353 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-202ENST00000400353 NECTIN2Q92692 538 aa13.25□□□□□ -0.29
LINC00649-202ENST00000400353 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
LINC00649-202ENST00000400353 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
LINC00649-202ENST00000400353 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-202ENST00000400353 HDAC5Q9UQL6 1122 aa13.25□□□□□ -0.29
LINC00649-202ENST00000400353 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-202ENST00000400353 AOX1Q06278 1338 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 SMARCA5O60264 1052 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-202ENST00000400353 RAB11FIP3O75154 756 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 PXDNQ92626 1479 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 ERBB3P21860 1342 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
LINC00649-202ENST00000400353 SDSP20132 328 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
LINC00649-202ENST00000400353 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-202ENST00000400353 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
LINC00649-202ENST00000400353 HEG1Q9ULI3 1381 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 REC8O95072 547 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
LINC00649-202ENST00000400353 PDE1AP54750 535 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 RABEP1Q15276 862 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 KIF2CQ99661 725 aa13.23□□□□□ -0.29
LINC00649-202ENST00000400353 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
LINC00649-202ENST00000400353 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
LINC00649-202ENST00000400353 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-202ENST00000400353 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00649-202ENST00000400353 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
LINC00649-202ENST00000400353 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms