RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 HSP90B2PQ58FF3 399 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
COL18A1-204ENST00000400337 AKAP2Q9Y2D5 859 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 CCDC83Q8IWF9 413 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 ACBD3Q9H3P7 528 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 NOL7Q9UMY1 257 aaKnown RBP21.45■■□□□ 1.02
COL18A1-204ENST00000400337 ZFYVE27Q5T4F4 411 aa21.45■■□□□ 1.02
COL18A1-204ENST00000400337 FERMT3Q86UX7 667 aa21.44■■□□□ 1.02
COL18A1-204ENST00000400337 FBLN1P23142 703 aa21.44■■□□□ 1.02
COL18A1-204ENST00000400337 AK7Q96M32 723 aa21.44■■□□□ 1.02
COL18A1-204ENST00000400337 NUP62CLQ9H1M0 184 aa21.44■■□□□ 1.02
COL18A1-204ENST00000400337 TTC21BQ7Z4L5 1316 aa21.43■■□□□ 1.02
COL18A1-204ENST00000400337 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
COL18A1-204ENST00000400337 IFIT1P09914 478 aaKnown RBP21.43■■□□□ 1.02
COL18A1-204ENST00000400337 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
COL18A1-204ENST00000400337 U3KPZ7 1027 aaPredicted RBP21.43■■□□□ 1.02
COL18A1-204ENST00000400337 PTPRCP08575 1304 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 DACH1Q9UI36 760 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 ACEP12821 1306 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 CCP110O43303 1012 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 ZHX3Q9H4I2 956 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 HYPKQ9NX55 129 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
COL18A1-204ENST00000400337 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
COL18A1-204ENST00000400337 ZSCAN29Q8IWY8 852 aaPredicted RBP21.41■■□□□ 1.02
COL18A1-204ENST00000400337 STIM1Q13586 685 aa21.4■■□□□ 1.02
COL18A1-204ENST00000400337 IFIT5Q13325 482 aaKnown RBP21.4■■□□□ 1.02
COL18A1-204ENST00000400337 A0A087WZG4 1122 aa21.4■■□□□ 1.02
COL18A1-204ENST00000400337 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
COL18A1-204ENST00000400337 PPFIBP1Q86W92 1011 aa21.39■■□□□ 1.02
COL18A1-204ENST00000400337 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.02
COL18A1-204ENST00000400337 IL27Q8NEV9 243 aa21.39■■□□□ 1.02
COL18A1-204ENST00000400337 KRT28Q7Z3Y7 464 aa21.39■■□□□ 1.01
COL18A1-204ENST00000400337 ZNHIT6Q9NWK9 470 aaKnown RBP21.39■■□□□ 1.01
COL18A1-204ENST00000400337 PATL2C9JE40 543 aaKnown RBP21.39■■□□□ 1.01
COL18A1-204ENST00000400337 CEP57L1Q8IYX8 460 aa21.39■■□□□ 1.01
COL18A1-204ENST00000400337 PDIA4P13667 645 aaKnown RBP21.38■■□□□ 1.01
COL18A1-204ENST00000400337 HSP90AB2PQ58FF8 381 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 ANKRD36BQ8N2N9 1353 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 TMEM132AQ24JP5 1023 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 CDR1P51861 262 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 WASF1Q92558 559 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 HMGN5P82970 282 aaKnown RBP21.38■■□□□ 1.01
COL18A1-204ENST00000400337 SYCE3A1L190 88 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 ADAMTS2O95450 1211 aa21.38■■□□□ 1.01
COL18A1-204ENST00000400337 TRMT112Q9UI30 125 aaKnown RBP21.38■■□□□ 1.01
COL18A1-204ENST00000400337 MAP3K2Q9Y2U5 619 aa21.37■■□□□ 1.01
COL18A1-204ENST00000400337 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
COL18A1-204ENST00000400337 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
COL18A1-204ENST00000400337 MINDY4BA8MYZ0 360 aa21.36■■□□□ 1.01
COL18A1-204ENST00000400337 IGHDP01880 384 aa21.36■■□□□ 1.01
COL18A1-204ENST00000400337 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
COL18A1-204ENST00000400337 SSBP05455 408 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL18A1-204ENST00000400337 CAMK4Q16566 473 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 TANGO6Q9C0B7 1094 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 MTERF4Q7Z6M4 381 aaKnown RBP21.35■■□□□ 1.01
COL18A1-204ENST00000400337 ZPR1O75312 459 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 MAP3K11Q16584 847 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 NAPBQ9H115 298 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 IL16Q14005 1332 aa21.35■■□□□ 1.01
COL18A1-204ENST00000400337 PI4KAP2A4QPH2 592 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 PI4KAP1Q8N8J0 262 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 ATP10BO94823 1461 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 FILIP1Q7Z7B0 1213 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
COL18A1-204ENST00000400337 SYCP1Q15431 976 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 MAP7D2Q96T17 732 aa21.34■■□□□ 1.01
COL18A1-204ENST00000400337 CBFA2T2O43439 604 aa21.33■■□□□ 1.01
COL18A1-204ENST00000400337 GPTP24298 496 aa21.33■■□□□ 1.01
COL18A1-204ENST00000400337 TBC1D9Q6ZT07 1266 aa21.33■■□□□ 1.01
COL18A1-204ENST00000400337 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
COL18A1-204ENST00000400337 HSP90AB3PQ58FF7 597 aa21.33■■□□□ 1.01
COL18A1-204ENST00000400337 ERCC4Q92889 916 aaPredicted RBP21.33■■□□□ 1.01
COL18A1-204ENST00000400337 SH2B1Q9NRF2 756 aaPredicted RBP21.33■■□□□ 1.01
COL18A1-204ENST00000400337 ECHDC1Q9NTX5 307 aa21.33■■□□□ 1
COL18A1-204ENST00000400337 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 FAM177A1Q8N128 213 aaPredicted RBP21.32■■□□□ 1
COL18A1-204ENST00000400337 ANXA1P04083 346 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 USP5P45974 858 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 ANKRD24Q8TF21 1146 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 DEF6Q9H4E7 631 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 MAP3K12Q12852 859 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 BMP2KLQ5H9B9 411 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 PLCH2O75038 1416 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 TSHZ3Q63HK5 1081 aa21.32■■□□□ 1
COL18A1-204ENST00000400337 LARP6Q9BRS8 491 aaKnown RBP21.31■■□□□ 1
COL18A1-204ENST00000400337 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
COL18A1-204ENST00000400337 LIMCH1Q9UPQ0 1083 aa21.31■■□□□ 1
COL18A1-204ENST00000400337 HMGB2P26583 209 aaKnown RBP21.31■■□□□ 1
COL18A1-204ENST00000400337 SSFA2P28290 1259 aa21.31■■□□□ 1
COL18A1-204ENST00000400337 BMP2KQ9NSY1 1161 aaPredicted RBP21.31■■□□□ 1
COL18A1-204ENST00000400337 RAPGEF6Q8TEU7 1601 aa21.31■■□□□ 1
COL18A1-204ENST00000400337 TNRQ92752 1358 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 EVI5LQ96CN4 794 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 PIK3R4Q99570 1358 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms