RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.2
RUNX3-203ENST00000399916 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
RUNX3-203ENST00000399916 CAPN2P17655 700 aa16.27■□□□□ 0.2
RUNX3-203ENST00000399916 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.19
RUNX3-203ENST00000399916 MCM6Q14566 821 aa16.27■□□□□ 0.19
RUNX3-203ENST00000399916 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
RUNX3-203ENST00000399916 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
RUNX3-203ENST00000399916 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
RUNX3-203ENST00000399916 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
RUNX3-203ENST00000399916 DHX8Q14562 1220 aaKnown RBP16.26■□□□□ 0.19
RUNX3-203ENST00000399916 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 PAXBP1Q9Y5B6 917 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 USP8P40818 1118 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 SDF4Q9BRK5 362 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 ACBD3Q9H3P7 528 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
RUNX3-203ENST00000399916 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 LMBRD1Q9NUN5 540 aa16.25■□□□□ 0.19
RUNX3-203ENST00000399916 ANKRD65E5RJM6 399 aa16.24■□□□□ 0.19
RUNX3-203ENST00000399916 FBLN1P23142 703 aa16.24■□□□□ 0.19
RUNX3-203ENST00000399916 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
RUNX3-203ENST00000399916 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
RUNX3-203ENST00000399916 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 E9PCH4 1651 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 ANKRD20A12PQ8NF67 263 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 TSPOAP1O95153 1857 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 NUCB1Q02818 461 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
RUNX3-203ENST00000399916 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
RUNX3-203ENST00000399916 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 ZSCAN26Q16670 478 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
RUNX3-203ENST00000399916 SNX21Q969T3 373 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 TERF2Q15554 542 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
RUNX3-203ENST00000399916 PYCARDQ9ULZ3 195 aa16.22■□□□□ 0.19
RUNX3-203ENST00000399916 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
RUNX3-203ENST00000399916 KIAA0754O94854 1291 aa16.21■□□□□ 0.19
RUNX3-203ENST00000399916 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
RUNX3-203ENST00000399916 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
RUNX3-203ENST00000399916 LRMPQ12912 555 aa16.21■□□□□ 0.19
RUNX3-203ENST00000399916 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.19
RUNX3-203ENST00000399916 PES1O00541 588 aaKnown RBP16.21■□□□□ 0.19
RUNX3-203ENST00000399916 HMMRO75330 724 aa16.21■□□□□ 0.19
RUNX3-203ENST00000399916 SLU7O95391 586 aaKnown RBP16.21■□□□□ 0.19
RUNX3-203ENST00000399916 GOLIM4O00461 696 aa16.21■□□□□ 0.18
RUNX3-203ENST00000399916 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.18
RUNX3-203ENST00000399916 SKILP12757 684 aa16.21■□□□□ 0.18
RUNX3-203ENST00000399916 CDR1P51861 262 aa16.21■□□□□ 0.18
RUNX3-203ENST00000399916 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 RABEP2Q9H5N1 569 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 ZNF215Q9UL58 517 aaPredicted RBP16.2■□□□□ 0.18
RUNX3-203ENST00000399916 TULP1O00294 542 aaPredicted RBP16.2■□□□□ 0.18
RUNX3-203ENST00000399916 BMP2KLQ5H9B9 411 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 CNPY2Q9Y2B0 182 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 NEO1Q92859 1461 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 KDM4AO75164 1064 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 GCC1Q96CN9 775 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 POGZQ7Z3K3 1410 aa16.2■□□□□ 0.18
RUNX3-203ENST00000399916 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
RUNX3-203ENST00000399916 ST7Q9NRC1 585 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
RUNX3-203ENST00000399916 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 UVSSAQ2YD98 709 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 CROCC2H7BZ55 1655 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 VPS18Q9P253 973 aa16.19■□□□□ 0.18
RUNX3-203ENST00000399916 LUZP1Q86V48 1076 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 GPT2Q8TD30 523 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 EP400NLQ6ZTU2 488 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
RUNX3-203ENST00000399916 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
RUNX3-203ENST00000399916 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 DNAI1Q9UI46 699 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 ERC2O15083 957 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 MAP2K2P36507 400 aa16.18■□□□□ 0.18
RUNX3-203ENST00000399916 TFIP11Q9UBB9 837 aaKnown RBP16.18■□□□□ 0.18
RUNX3-203ENST00000399916 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
RUNX3-203ENST00000399916 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
RUNX3-203ENST00000399916 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
RUNX3-203ENST00000399916 ZNF165P49910 485 aa16.17■□□□□ 0.18
RUNX3-203ENST00000399916 RNF20Q5VTR2 975 aa16.17■□□□□ 0.18
RUNX3-203ENST00000399916 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
RUNX3-203ENST00000399916 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
RUNX3-203ENST00000399916 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
RUNX3-203ENST00000399916 SAMD9LQ8IVG5 1584 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 ERCC6LQ2NKX8 1250 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 NOS1P29475 1434 aa16.16■□□□□ 0.18
RUNX3-203ENST00000399916 GYS2P54840 703 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms