RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 PKNOX2Q96KN3 472 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 PHAXQ9H814 394 aaKnown RBP14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 BCAR3O75815 825 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 SRGAP3O43295 1099 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 WDHD1O75717 1129 aaPredicted RBP14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 CAMK4Q16566 473 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 HOMER2Q9NSB8 354 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 CTNNA2P26232 953 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 PABPN1LA6NDY0 278 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 PTPN14Q15678 1187 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 TMEM266Q2M3C6 531 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
CACNA1C-219ENST00000399649 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 FERP16591 822 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 RNF187Q5TA31 235 aaPredicted RBP14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 RAB34Q9BZG1 259 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 CAVIN4Q5BKX8 364 aa14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 DDX23Q9BUQ8 820 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-219ENST00000399649 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 CDK19Q9BWU1 502 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 METTL24Q5JXM2 366 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 WDR63Q8IWG1 891 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 TSNARE1Q96NA8 513 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 KLHL10Q6JEL2 608 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 SPATA24Q86W54 205 aa14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 THEMISQ8N1K5 641 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-219ENST00000399649 KIF20AO95235 890 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
CACNA1C-219ENST00000399649 MACROD2A1Z1Q3 448 aa14.27□□□□□ -0.12
CACNA1C-219ENST00000399649 CCDC196A0A1B0GTZ2 297 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 MINDY4BA8MYZ0 360 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 YEATS4O95619 227 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 STARD3NLO95772 234 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 CCDC175P0C221 793 aa14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 NAA15Q9BXJ9 866 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-219ENST00000399649 SYCE3A1L190 88 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 KIF18AQ8NI77 898 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 PSMD1Q99460 953 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 URI1O94763 535 aaPredicted RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 BAG4O95429 457 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 TNNT1P13805 278 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 DNA2P51530 1060 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 SSRP1Q08945 709 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 FERMT1Q9BQL6 677 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 DZIP1Q86YF9 867 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 CCDC183Q5T5S1 534 aa14.26□□□□□ -0.13
CACNA1C-219ENST00000399649 LIG1P18858 919 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 SSX2IPQ9Y2D8 614 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 RAB11FIP3O75154 756 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 CETN1Q12798 172 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 ANKRD50Q9ULJ7 1429 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 C6orf163Q5TEZ5 329 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 CTCFLQ8NI51 663 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 CCDC85AQ96PX6 553 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 A0A087WZG4 1122 aa14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 TTLL12Q14166 644 aaPredicted RBP14.25□□□□□ -0.13
CACNA1C-219ENST00000399649 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 NAPBQ9H115 298 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 ZPR1O75312 459 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 LMAN1P49257 510 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 RRP9O43818 475 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms