RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 LMAN1P49257 510 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 ST5P78524 1137 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 RAB3IL1Q8TBN0 382 aa13.04□□□□□ -0.32
CACNA1C-206ENST00000399595 ERCC3P19447 782 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 GNAI1P63096 354 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 RAPGEF3O95398 923 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 GPR162Q16538 588 aa13.03□□□□□ -0.32
CACNA1C-206ENST00000399595 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 PRAM1Q96QH2 718 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 CTR9Q6PD62 1173 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 CPSF2Q9P2I0 782 aaKnown RBP13.02□□□□□ -0.32
CACNA1C-206ENST00000399595 DZIP1LQ8IYY4 767 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 LUZP1Q86V48 1076 aa13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
CACNA1C-206ENST00000399595 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 MXRA7P84157 204 aa13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 PAIP2Q9BPZ3 127 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 ARID4AP29374 1257 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-206ENST00000399595 CNTROBQ8N137 903 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 SETSIPP0DME0 302 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 FAM114A1Q8IWE2 563 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
CACNA1C-206ENST00000399595 CCDC6Q16204 474 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 ZSCAN30Q86W11 494 aa13□□□□□ -0.33
CACNA1C-206ENST00000399595 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
CACNA1C-206ENST00000399595 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 SATB1Q01826 763 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 ZBED9Q6R2W3 1325 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 HSPA4P34932 840 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 ME1P48163 572 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 CTNNA2P26232 953 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
CACNA1C-206ENST00000399595 NOL3O60936 208 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 SARNPP82979 210 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 KIF3CO14782 793 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 KIF5CO60282 957 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 NEK4P51957 841 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 FBF1Q8TES7 1133 aa12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-206ENST00000399595 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 SIL1Q9H173 461 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 CEP83Q9Y592 693 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
CACNA1C-206ENST00000399595 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 PDCP20941 246 aa12.96□□□□□ -0.33
CACNA1C-206ENST00000399595 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms