RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
ABCC1-201ENST00000399408 FLIIQ13045 1269 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 NUP62CLQ9H1M0 184 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 MTERF4Q7Z6M4 381 aaKnown RBP18.05■□□□□ 0.48
ABCC1-201ENST00000399408 ATP2B2Q01814 1243 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 TTLL5Q6EMB2 1281 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
ABCC1-201ENST00000399408 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
ABCC1-201ENST00000399408 PLCH2O75038 1416 aa18.04■□□□□ 0.48
ABCC1-201ENST00000399408 CDR1P51861 262 aa18.04■□□□□ 0.48
ABCC1-201ENST00000399408 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
ABCC1-201ENST00000399408 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
ABCC1-201ENST00000399408 WASF1Q92558 559 aa18.04■□□□□ 0.48
ABCC1-201ENST00000399408 BOLA2Q9H3K6 86 aa18.04■□□□□ 0.48
ABCC1-201ENST00000399408 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
ABCC1-201ENST00000399408 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
ABCC1-201ENST00000399408 MBIPQ9NS73 344 aa18.03■□□□□ 0.48
ABCC1-201ENST00000399408 ATP10BO94823 1461 aa18.03■□□□□ 0.48
ABCC1-201ENST00000399408 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
ABCC1-201ENST00000399408 NUP160Q12769 1436 aa18.03■□□□□ 0.48
ABCC1-201ENST00000399408 CEP57L1Q8IYX8 460 aa18.03■□□□□ 0.48
ABCC1-201ENST00000399408 STIM1Q13586 685 aa18.02■□□□□ 0.48
ABCC1-201ENST00000399408 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
ABCC1-201ENST00000399408 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.48
ABCC1-201ENST00000399408 BICDL1Q6ZP65 573 aa18.02■□□□□ 0.48
ABCC1-201ENST00000399408 ODF2Q5BJF6 829 aa18.02■□□□□ 0.48
ABCC1-201ENST00000399408 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.47
ABCC1-201ENST00000399408 ACEP12821 1306 aa18.01■□□□□ 0.47
ABCC1-201ENST00000399408 DDX11Q96FC9 970 aa18.01■□□□□ 0.47
ABCC1-201ENST00000399408 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
ABCC1-201ENST00000399408 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
ABCC1-201ENST00000399408 ERCC4Q92889 916 aaPredicted RBP18.01■□□□□ 0.47
ABCC1-201ENST00000399408 ZNHIT6Q9NWK9 470 aaKnown RBP18.01■□□□□ 0.47
ABCC1-201ENST00000399408 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
ABCC1-201ENST00000399408 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
ABCC1-201ENST00000399408 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
ABCC1-201ENST00000399408 CBFA2T2O43439 604 aa18■□□□□ 0.47
ABCC1-201ENST00000399408 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
ABCC1-201ENST00000399408 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
ABCC1-201ENST00000399408 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
ABCC1-201ENST00000399408 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
ABCC1-201ENST00000399408 FAM83GA6ND36 823 aa17.99■□□□□ 0.47
ABCC1-201ENST00000399408 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
ABCC1-201ENST00000399408 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
ABCC1-201ENST00000399408 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
ABCC1-201ENST00000399408 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
ABCC1-201ENST00000399408 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
ABCC1-201ENST00000399408 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
ABCC1-201ENST00000399408 TNRQ92752 1358 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 MPNDQ8N594 471 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 A0A087WZG4 1122 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 RBM5P52756 815 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■□□□ 13.4
ABCC1-201ENST00000399408 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
ABCC1-201ENST00000399408 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
ABCC1-201ENST00000399408 SYCE3A1L190 88 aa17.96■□□□□ 0.47
ABCC1-201ENST00000399408 IGHDP01880 384 aa17.96■□□□□ 0.47
ABCC1-201ENST00000399408 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
ABCC1-201ENST00000399408 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
ABCC1-201ENST00000399408 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.47
ABCC1-201ENST00000399408 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
ABCC1-201ENST00000399408 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 CAVIN4Q5BKX8 364 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
ABCC1-201ENST00000399408 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
ABCC1-201ENST00000399408 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
ABCC1-201ENST00000399408 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
ABCC1-201ENST00000399408 A2MP01023 1474 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 TCOF1Q13428 1488 aaKnown RBP17.94■□□□□ 0.46
ABCC1-201ENST00000399408 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 ZHX3Q9H4I2 956 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 CCDC112Q8NEF3 446 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 NAPBQ9H115 298 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 MAP3K12Q12852 859 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 MYO6Q9UM54 1294 aa17.94■□□□□ 0.46
ABCC1-201ENST00000399408 SF3B2Q13435 895 aaKnown RBP17.93■□□□□ 0.46
ABCC1-201ENST00000399408 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-201ENST00000399408 SYCP1Q15431 976 aa17.93■□□□□ 0.46
ABCC1-201ENST00000399408 LUC7LQ9NQ29 371 aaKnown RBP17.93■□□□□ 0.46
ABCC1-201ENST00000399408 ZSCAN29Q8IWY8 852 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-201ENST00000399408 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-201ENST00000399408 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
ABCC1-201ENST00000399408 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
ABCC1-201ENST00000399408 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 ESPNB1AK53 854 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
ABCC1-201ENST00000399408 TTC22Q5TAA0 569 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms