RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
APOB-202ENST00000399256 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
APOB-202ENST00000399256 SLIT1O75093 1534 aa17■□□□□ 0.31
APOB-202ENST00000399256 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
APOB-202ENST00000399256 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
APOB-202ENST00000399256 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 MCM10Q7L590 875 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
APOB-202ENST00000399256 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
APOB-202ENST00000399256 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 EXOC6BQ9Y2D4 811 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 CUL4AQ13619 759 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
APOB-202ENST00000399256 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
APOB-202ENST00000399256 HMMRO75330 724 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 TSC1Q92574 1164 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 ATP7BP35670 1465 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 MCM2P49736 904 aa16.97■□□□□ 0.31
APOB-202ENST00000399256 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
APOB-202ENST00000399256 F6X3S4 739 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 MCCP23508 829 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 PTPRCP08575 1304 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 LTKP29376 864 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
APOB-202ENST00000399256 C17orf53Q8N3J3 647 aaPredicted RBP16.95■□□□□ 0.3
APOB-202ENST00000399256 COG3Q96JB2 828 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
APOB-202ENST00000399256 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 CHL1O00533 1208 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 G2E3Q7L622 706 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 PHF14O94880 888 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
APOB-202ENST00000399256 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
APOB-202ENST00000399256 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 INTS4Q96HW7 963 aaKnown RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 SMAP1Q8IYB5 467 aaPredicted RBP16.93■□□□□ 0.3
APOB-202ENST00000399256 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
APOB-202ENST00000399256 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 CHMLP26374 656 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 METP08581 1390 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 MX1P20591 662 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
APOB-202ENST00000399256 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 ADCY5O95622 1261 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 NOLC1Q14978 699 aaKnown RBP eCLIP16.91■□□□□ 0.32e-45■■□□□ 12.7
APOB-202ENST00000399256 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
APOB-202ENST00000399256 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
APOB-202ENST00000399256 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
APOB-202ENST00000399256 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 CPS1P31327 1500 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 ANAPC15P60006 121 aa16.9■□□□□ 0.3
APOB-202ENST00000399256 GNAI2P04899 355 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 IL25Q9H293 177 aa16.89■□□□□ 0.29
APOB-202ENST00000399256 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
APOB-202ENST00000399256 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
APOB-202ENST00000399256 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
APOB-202ENST00000399256 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
APOB-202ENST00000399256 RPAP1Q9BWH6 1393 aaPredicted RBP16.87■□□□□ 0.29
APOB-202ENST00000399256 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
APOB-202ENST00000399256 TECPR2O15040 1411 aa16.86■□□□□ 0.29
APOB-202ENST00000399256 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
APOB-202ENST00000399256 TCHHQ07283 1943 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 DTNBO60941 627 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
APOB-202ENST00000399256 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 DIP2AQ14689 1571 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 FIBPO43427 364 aa16.85■□□□□ 0.29
APOB-202ENST00000399256 FOXO3O43524 673 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms