RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 EZH2Q15910 746 aaKnown RBP13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 PIGBQ92521 554 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 LGR6Q9HBX8 967 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
CYCSP55-201ENST00000399027 CCER2I3L3R5 266 aa13.83□□□□□ -0.2
CYCSP55-201ENST00000399027 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
CYCSP55-201ENST00000399027 SLC52A2Q9HAB3 445 aa13.83□□□□□ -0.2
CYCSP55-201ENST00000399027 TJP1Q07157 1748 aa13.83□□□□□ -0.2
CYCSP55-201ENST00000399027 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
CYCSP55-201ENST00000399027 CABP4P57796 275 aa13.82□□□□□ -0.2
CYCSP55-201ENST00000399027 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
CYCSP55-201ENST00000399027 PROM2Q8N271 834 aa13.82□□□□□ -0.2
CYCSP55-201ENST00000399027 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
CYCSP55-201ENST00000399027 TMPOP42166 694 aaKnown RBP13.81□□□□□ -0.2
CYCSP55-201ENST00000399027 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
CYCSP55-201ENST00000399027 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
CYCSP55-201ENST00000399027 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
CYCSP55-201ENST00000399027 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
CYCSP55-201ENST00000399027 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
CYCSP55-201ENST00000399027 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
CYCSP55-201ENST00000399027 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
CYCSP55-201ENST00000399027 SLC27A3Q5K4L6 730 aa13.79□□□□□ -0.2
CYCSP55-201ENST00000399027 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
CYCSP55-201ENST00000399027 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
CYCSP55-201ENST00000399027 RIPK4P57078 832 aa13.78□□□□□ -0.2
CYCSP55-201ENST00000399027 TEFQ10587 303 aa13.78□□□□□ -0.2
CYCSP55-201ENST00000399027 MCM10Q7L590 875 aa13.78□□□□□ -0.2
CYCSP55-201ENST00000399027 MIER1Q8N108 512 aa13.78□□□□□ -0.2
CYCSP55-201ENST00000399027 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
CYCSP55-201ENST00000399027 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
CYCSP55-201ENST00000399027 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
CYCSP55-201ENST00000399027 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
CYCSP55-201ENST00000399027 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
CYCSP55-201ENST00000399027 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
CYCSP55-201ENST00000399027 APAF1O14727 1248 aa13.76□□□□□ -0.21
CYCSP55-201ENST00000399027 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
CYCSP55-201ENST00000399027 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
CYCSP55-201ENST00000399027 SIK1P57059 783 aa13.75□□□□□ -0.21
CYCSP55-201ENST00000399027 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
CYCSP55-201ENST00000399027 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
CYCSP55-201ENST00000399027 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
CYCSP55-201ENST00000399027 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
CYCSP55-201ENST00000399027 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
CYCSP55-201ENST00000399027 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
CYCSP55-201ENST00000399027 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 NEUROD2Q15784 382 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
CYCSP55-201ENST00000399027 KCNQ4P56696 695 aa13.72□□□□□ -0.21
CYCSP55-201ENST00000399027 NBPF14Q5TI25 921 aa13.72□□□□□ -0.21
CYCSP55-201ENST00000399027 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
CYCSP55-201ENST00000399027 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
CYCSP55-201ENST00000399027 C4AP0C0L4 1744 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 ATP6V1AP38606 617 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 ITPK1Q13572 414 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
CYCSP55-201ENST00000399027 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.22
CYCSP55-201ENST00000399027 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
CYCSP55-201ENST00000399027 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
CYCSP55-201ENST00000399027 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
CYCSP55-201ENST00000399027 KCNQ3O43525 872 aa13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
CYCSP55-201ENST00000399027 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
CYCSP55-201ENST00000399027 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
CYCSP55-201ENST00000399027 CHL1O00533 1208 aa13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
CYCSP55-201ENST00000399027 R3HDM1Q15032 1099 aaKnown RBP13.66□□□□□ -0.22
CYCSP55-201ENST00000399027 DNAJC10Q8IXB1 793 aa13.66□□□□□ -0.22
CYCSP55-201ENST00000399027 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
CYCSP55-201ENST00000399027 IFT57Q9NWB7 429 aa13.66□□□□□ -0.22
CYCSP55-201ENST00000399027 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
CYCSP55-201ENST00000399027 LRP5O75197 1615 aa13.65□□□□□ -0.22
CYCSP55-201ENST00000399027 CYP19A1P11511 503 aaPredicted RBP13.65□□□□□ -0.22
CYCSP55-201ENST00000399027 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
CYCSP55-201ENST00000399027 IL16Q14005 1332 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 BCORQ6W2J9 1755 aa13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 PSDA5PKW4 1024 aaPredicted RBP13.64□□□□□ -0.23
CYCSP55-201ENST00000399027 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms