RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
TUBA4A-203ENST00000398989 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
TUBA4A-203ENST00000398989 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
TUBA4A-203ENST00000398989 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 HMGB2P26583 209 aaKnown RBP18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 MRC1P22897 1456 aa18.64■□□□□ 0.57
TUBA4A-203ENST00000398989 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 FCHSD2O94868 740 aa18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 ATF5Q9Y2D1 282 aaPredicted RBP18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 UBR3Q6ZT12 1888 aa18.63■□□□□ 0.57
TUBA4A-203ENST00000398989 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
TUBA4A-203ENST00000398989 MTFR1LQ9H019 292 aa18.62■□□□□ 0.57
TUBA4A-203ENST00000398989 MYBBP1AQ9BQG0 1328 aaKnown RBP18.62■□□□□ 0.57
TUBA4A-203ENST00000398989 COL5A3P25940 1745 aaPredicted RBP18.61■□□□□ 0.57
TUBA4A-203ENST00000398989 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
TUBA4A-203ENST00000398989 ITPK1Q13572 414 aa18.61■□□□□ 0.57
TUBA4A-203ENST00000398989 AK7Q96M32 723 aa18.61■□□□□ 0.57
TUBA4A-203ENST00000398989 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
TUBA4A-203ENST00000398989 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
TUBA4A-203ENST00000398989 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
TUBA4A-203ENST00000398989 MSH5O43196 834 aa18.59■□□□□ 0.57
TUBA4A-203ENST00000398989 PTGER2P43116 358 aa18.59■□□□□ 0.57
TUBA4A-203ENST00000398989 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
TUBA4A-203ENST00000398989 SIPA1L3O60292 1781 aaPredicted RBP18.59■□□□□ 0.57
TUBA4A-203ENST00000398989 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
TUBA4A-203ENST00000398989 TJP1Q07157 1748 aa18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 SLC16A10Q8TF71 515 aa18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 PRKRIP1Q9H875 184 aaPredicted RBP18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
TUBA4A-203ENST00000398989 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 UBR2Q8IWV8 1755 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 GNPATO15228 680 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 PHF14O94880 888 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 TEFQ10587 303 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 SLC39A6Q13433 755 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
TUBA4A-203ENST00000398989 NEFMP07197 916 aa18.55■□□□□ 0.56
TUBA4A-203ENST00000398989 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
TUBA4A-203ENST00000398989 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
TUBA4A-203ENST00000398989 MYH14Q7Z406 1995 aaKnown RBP18.55■□□□□ 0.56
TUBA4A-203ENST00000398989 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
TUBA4A-203ENST00000398989 SMIM5Q71RC9 77 aa18.54■□□□□ 0.56
TUBA4A-203ENST00000398989 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
TUBA4A-203ENST00000398989 CEMIPQ8WUJ3 1361 aa18.54■□□□□ 0.56
TUBA4A-203ENST00000398989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.53■□□□□ 0.56
TUBA4A-203ENST00000398989 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
TUBA4A-203ENST00000398989 SSFA2P28290 1259 aa18.52■□□□□ 0.56
TUBA4A-203ENST00000398989 POLD1P28340 1107 aa18.52■□□□□ 0.56
TUBA4A-203ENST00000398989 MCM10Q7L590 875 aa18.52■□□□□ 0.56
TUBA4A-203ENST00000398989 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
TUBA4A-203ENST00000398989 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
TUBA4A-203ENST00000398989 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
TUBA4A-203ENST00000398989 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
TUBA4A-203ENST00000398989 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
TUBA4A-203ENST00000398989 ARXQ96QS3 562 aa18.51■□□□□ 0.55
TUBA4A-203ENST00000398989 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
TUBA4A-203ENST00000398989 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
TUBA4A-203ENST00000398989 RTCBQ9Y3I0 505 aaKnown RBP18.5■□□□□ 0.55
TUBA4A-203ENST00000398989 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
TUBA4A-203ENST00000398989 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
TUBA4A-203ENST00000398989 CRKLP46109 303 aaKnown RBP18.49■□□□□ 0.55
TUBA4A-203ENST00000398989 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
TUBA4A-203ENST00000398989 DNAJC10Q8IXB1 793 aa18.49■□□□□ 0.55
TUBA4A-203ENST00000398989 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
TUBA4A-203ENST00000398989 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
TUBA4A-203ENST00000398989 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
TUBA4A-203ENST00000398989 RPS6KA4O75676 772 aa18.47■□□□□ 0.55
TUBA4A-203ENST00000398989 TRAPPC3LQ5T215 181 aa18.47■□□□□ 0.55
TUBA4A-203ENST00000398989 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
TUBA4A-203ENST00000398989 FHDC1Q9C0D6 1143 aaPredicted RBP18.47■□□□□ 0.55
TUBA4A-203ENST00000398989 ZNF496Q96IT1 587 aaPredicted RBP18.46■□□□□ 0.55
TUBA4A-203ENST00000398989 ADRA2BP18089 450 aa18.45■□□□□ 0.54
TUBA4A-203ENST00000398989 CCDC146Q8IYE0 955 aa18.45■□□□□ 0.54
TUBA4A-203ENST00000398989 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
TUBA4A-203ENST00000398989 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
TUBA4A-203ENST00000398989 HEG1Q9ULI3 1381 aa18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 KCNQ3O43525 872 aa18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 CYP19A1P11511 503 aaPredicted RBP18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 FMNL2Q96PY5 1086 aa18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 SYT17Q9BSW7 474 aa18.44■□□□□ 0.54
TUBA4A-203ENST00000398989 RFC4P35249 363 aa18.43■□□□□ 0.54
TUBA4A-203ENST00000398989 ADAMTS8Q9UP79 889 aa18.43■□□□□ 0.54
TUBA4A-203ENST00000398989 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
TUBA4A-203ENST00000398989 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
TUBA4A-203ENST00000398989 RIPK4P57078 832 aa18.41■□□□□ 0.54
TUBA4A-203ENST00000398989 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
TUBA4A-203ENST00000398989 ZBTB1Q9Y2K1 713 aa18.41■□□□□ 0.54
TUBA4A-203ENST00000398989 ANP32CO43423 234 aa18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 STARD3NLO95772 234 aa18.4■□□□□ 0.54
TUBA4A-203ENST00000398989 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms