RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DLG5Q8TDM6 1919 aa20.92■□□□□ 0.94
MBD1-207ENST00000398488 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
MBD1-207ENST00000398488 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
MBD1-207ENST00000398488 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
MBD1-207ENST00000398488 RUNDC1Q96C34 613 aa20.9■□□□□ 0.94
MBD1-207ENST00000398488 SLC4A9Q96Q91 983 aa20.9■□□□□ 0.94
MBD1-207ENST00000398488 MAPK8IP3Q9UPT6 1336 aa20.9■□□□□ 0.94
MBD1-207ENST00000398488 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.94
MBD1-207ENST00000398488 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.94
MBD1-207ENST00000398488 SLC39A6Q13433 755 aa20.89■□□□□ 0.94
MBD1-207ENST00000398488 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.94
MBD1-207ENST00000398488 PNNQ9H307 717 aaKnown RBP20.89■□□□□ 0.94
MBD1-207ENST00000398488 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
MBD1-207ENST00000398488 PAPPAQ13219 1627 aa20.87■□□□□ 0.93
MBD1-207ENST00000398488 SIPA1L3O60292 1781 aaPredicted RBP20.87■□□□□ 0.93
MBD1-207ENST00000398488 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
MBD1-207ENST00000398488 NEFMP07197 916 aa20.87■□□□□ 0.93
MBD1-207ENST00000398488 MIER1Q8N108 512 aa20.87■□□□□ 0.93
MBD1-207ENST00000398488 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
MBD1-207ENST00000398488 RIPK4P57078 832 aa20.86■□□□□ 0.93
MBD1-207ENST00000398488 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
MBD1-207ENST00000398488 LOC102724428A0A0B4J2F2 783 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 KCNQ3O43525 872 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
MBD1-207ENST00000398488 SIK1P57059 783 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 ITPK1Q13572 414 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
MBD1-207ENST00000398488 ZNF827Q17R98 1081 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 SLC27A3Q5K4L6 730 aa20.85■□□□□ 0.93
MBD1-207ENST00000398488 APAF1O14727 1248 aa20.84■□□□□ 0.93
MBD1-207ENST00000398488 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
MBD1-207ENST00000398488 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
MBD1-207ENST00000398488 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.93
MBD1-207ENST00000398488 TEFQ10587 303 aa20.83■□□□□ 0.93
MBD1-207ENST00000398488 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
MBD1-207ENST00000398488 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.92
MBD1-207ENST00000398488 LINC00116Q8NCU8 138 aa20.82■□□□□ 0.92
MBD1-207ENST00000398488 AKT1S1Q96B36 256 aa20.82■□□□□ 0.92
MBD1-207ENST00000398488 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
MBD1-207ENST00000398488 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
MBD1-207ENST00000398488 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
MBD1-207ENST00000398488 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
MBD1-207ENST00000398488 ATP6V1AP38606 617 aa20.8■□□□□ 0.92
MBD1-207ENST00000398488 SLC15A2Q16348 729 aa20.8■□□□□ 0.92
MBD1-207ENST00000398488 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
MBD1-207ENST00000398488 SMIM5Q71RC9 77 aa20.8■□□□□ 0.92
MBD1-207ENST00000398488 AMIGO3Q86WK7 504 aa20.79■□□□□ 0.92
MBD1-207ENST00000398488 C5P01031 1676 aa20.79■□□□□ 0.92
MBD1-207ENST00000398488 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
MBD1-207ENST00000398488 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
MBD1-207ENST00000398488 UBR2Q8IWV8 1755 aa20.78■□□□□ 0.92
MBD1-207ENST00000398488 CCER2I3L3R5 266 aa20.78■□□□□ 0.92
MBD1-207ENST00000398488 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
MBD1-207ENST00000398488 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
MBD1-207ENST00000398488 STK32BQ9NY57 414 aa20.78■□□□□ 0.92
MBD1-207ENST00000398488 TJP1Q07157 1748 aa20.77■□□□□ 0.92
MBD1-207ENST00000398488 TUBGCP6Q96RT7 1819 aa20.76■□□□□ 0.91
MBD1-207ENST00000398488 C4BP0C0L5 1744 aa20.76■□□□□ 0.91
MBD1-207ENST00000398488 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
MBD1-207ENST00000398488 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
MBD1-207ENST00000398488 COL5A3P25940 1745 aaPredicted RBP20.74■□□□□ 0.91
MBD1-207ENST00000398488 PRAMEF22A3QJZ6 481 aa20.73■□□□□ 0.91
MBD1-207ENST00000398488 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
MBD1-207ENST00000398488 PNPLA7Q6ZV29 1317 aa20.72■□□□□ 0.91
MBD1-207ENST00000398488 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
MBD1-207ENST00000398488 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
MBD1-207ENST00000398488 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
MBD1-207ENST00000398488 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
MBD1-207ENST00000398488 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
MBD1-207ENST00000398488 CASZ1Q86V15 1759 aa20.71■□□□□ 0.91
MBD1-207ENST00000398488 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
MBD1-207ENST00000398488 TFCP2L1Q9NZI6 479 aa20.71■□□□□ 0.91
MBD1-207ENST00000398488 CYP19A1P11511 503 aaPredicted RBP20.7■□□□□ 0.9
MBD1-207ENST00000398488 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
MBD1-207ENST00000398488 COL23A1Q86Y22 540 aaPredicted RBP20.69■□□□□ 0.9
MBD1-207ENST00000398488 FMNL2Q96PY5 1086 aa20.69■□□□□ 0.9
MBD1-207ENST00000398488 CRKLP46109 303 aaKnown RBP20.68■□□□□ 0.9
MBD1-207ENST00000398488 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 AK7Q96M32 723 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 CHL1O00533 1208 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 GNPATO15228 680 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
MBD1-207ENST00000398488 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
MBD1-207ENST00000398488 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
MBD1-207ENST00000398488 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
MBD1-207ENST00000398488 PHF14O94880 888 aa20.67■□□□□ 0.9
MBD1-207ENST00000398488 RC3H1Q5TC82 1133 aaKnown RBP20.67■□□□□ 0.9
MBD1-207ENST00000398488 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
MBD1-207ENST00000398488 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
MBD1-207ENST00000398488 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
MBD1-207ENST00000398488 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
MBD1-207ENST00000398488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.65■□□□□ 0.9
MBD1-207ENST00000398488 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
MBD1-207ENST00000398488 ZBTB1Q9Y2K1 713 aa20.64■□□□□ 0.9
MBD1-207ENST00000398488 SRCAPQ6ZRS2 3230 aa20.64■□□□□ 0.9
MBD1-207ENST00000398488 RPS6KA4O75676 772 aa20.63■□□□□ 0.89
MBD1-207ENST00000398488 A1BGP04217 495 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms