RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
NIFKP1-201ENST00000398317 MAP3K19Q56UN5 1328 aa13.76□□□□□ -0.21
NIFKP1-201ENST00000398317 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
NIFKP1-201ENST00000398317 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
NIFKP1-201ENST00000398317 UTRNP46939 3433 aa13.76□□□□□ -0.21
NIFKP1-201ENST00000398317 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
NIFKP1-201ENST00000398317 HOXC9P31274 260 aa13.75□□□□□ -0.21
NIFKP1-201ENST00000398317 AMPHP49418 695 aa13.75□□□□□ -0.21
NIFKP1-201ENST00000398317 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
NIFKP1-201ENST00000398317 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
NIFKP1-201ENST00000398317 PTGER2P43116 358 aa13.74□□□□□ -0.21
NIFKP1-201ENST00000398317 MYOM1P52179 1685 aa13.74□□□□□ -0.21
NIFKP1-201ENST00000398317 USP47Q96K76 1375 aa13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 YY1P25490 414 aa13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 TMF1P82094 1093 aa13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 RRS1Q15050 365 aaKnown RBP13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 GGNBP2Q9H3C7 697 aa13.73□□□□□ -0.21
NIFKP1-201ENST00000398317 FYB1O15117 783 aa13.72□□□□□ -0.21
NIFKP1-201ENST00000398317 LRRC4BQ9NT99 713 aa13.72□□□□□ -0.21
NIFKP1-201ENST00000398317 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
NIFKP1-201ENST00000398317 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
NIFKP1-201ENST00000398317 ZNF827Q17R98 1081 aa13.71□□□□□ -0.21
NIFKP1-201ENST00000398317 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
NIFKP1-201ENST00000398317 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 DOT1LQ8TEK3 1739 aa13.7□□□□□ -0.22
NIFKP1-201ENST00000398317 MEGF6O75095 1541 aa13.69□□□□□ -0.22
NIFKP1-201ENST00000398317 KCNQ4P56696 695 aa13.69□□□□□ -0.22
NIFKP1-201ENST00000398317 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
NIFKP1-201ENST00000398317 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
NIFKP1-201ENST00000398317 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
NIFKP1-201ENST00000398317 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
NIFKP1-201ENST00000398317 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
NIFKP1-201ENST00000398317 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
NIFKP1-201ENST00000398317 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
NIFKP1-201ENST00000398317 SYT17Q9BSW7 474 aa13.67□□□□□ -0.22
NIFKP1-201ENST00000398317 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
NIFKP1-201ENST00000398317 TUBGCP6Q96RT7 1819 aa13.67□□□□□ -0.22
NIFKP1-201ENST00000398317 CDCA8Q53HL2 280 aa13.66□□□□□ -0.22
NIFKP1-201ENST00000398317 HSP90AB2PQ58FF8 381 aa13.66□□□□□ -0.22
NIFKP1-201ENST00000398317 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
NIFKP1-201ENST00000398317 NSD2O96028 1365 aa13.66□□□□□ -0.22
NIFKP1-201ENST00000398317 LY75O60449 1722 aa13.65□□□□□ -0.22
NIFKP1-201ENST00000398317 ARXQ96QS3 562 aa13.65□□□□□ -0.22
NIFKP1-201ENST00000398317 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
NIFKP1-201ENST00000398317 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
NIFKP1-201ENST00000398317 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
NIFKP1-201ENST00000398317 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
NIFKP1-201ENST00000398317 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
NIFKP1-201ENST00000398317 INSRP06213 1382 aa13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
NIFKP1-201ENST00000398317 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 FLT4P35916 1363 aa13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 CHD4Q14839 1912 aa13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
NIFKP1-201ENST00000398317 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
NIFKP1-201ENST00000398317 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
NIFKP1-201ENST00000398317 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
NIFKP1-201ENST00000398317 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
NIFKP1-201ENST00000398317 ITGB4P16144 1822 aa13.6□□□□□ -0.23
NIFKP1-201ENST00000398317 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
NIFKP1-201ENST00000398317 POLD1P28340 1107 aa13.59□□□□□ -0.23
NIFKP1-201ENST00000398317 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
NIFKP1-201ENST00000398317 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
NIFKP1-201ENST00000398317 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
NIFKP1-201ENST00000398317 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.23
NIFKP1-201ENST00000398317 CYP27B1O15528 508 aa13.58□□□□□ -0.24
NIFKP1-201ENST00000398317 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
NIFKP1-201ENST00000398317 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
NIFKP1-201ENST00000398317 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
NIFKP1-201ENST00000398317 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
NIFKP1-201ENST00000398317 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
NIFKP1-201ENST00000398317 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
NIFKP1-201ENST00000398317 C5P01031 1676 aa13.56□□□□□ -0.24
NIFKP1-201ENST00000398317 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
NIFKP1-201ENST00000398317 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
NIFKP1-201ENST00000398317 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 GPR162Q16538 588 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 ZNF784Q8NCA9 323 aaPredicted RBP13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 EYA1Q99502 592 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
NIFKP1-201ENST00000398317 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
NIFKP1-201ENST00000398317 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
NIFKP1-201ENST00000398317 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms