RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 RGPD4Q7Z3J3 1758 aa33.5■■■□□ 2.95
TMEM55B-202ENST00000398020 CCER2I3L3R5 266 aa33.49■■■□□ 2.95
TMEM55B-202ENST00000398020 RIPK4P57078 832 aa33.49■■■□□ 2.95
TMEM55B-202ENST00000398020 SENP3-EIF4A1A0A087X0R7 540 aa33.48■■■□□ 2.95
TMEM55B-202ENST00000398020 PROM2Q8N271 834 aa33.48■■■□□ 2.95
TMEM55B-202ENST00000398020 MRC1P22897 1456 aa33.48■■■□□ 2.95
TMEM55B-202ENST00000398020 CEMIPQ8WUJ3 1361 aa33.47■■■□□ 2.95
TMEM55B-202ENST00000398020 PALLDQ8WX93 1383 aa33.46■■■□□ 2.95
TMEM55B-202ENST00000398020 APAF1O14727 1248 aa33.46■■■□□ 2.95
TMEM55B-202ENST00000398020 TEFQ10587 303 aa33.46■■■□□ 2.95
TMEM55B-202ENST00000398020 TXNRD1Q16881 649 aa33.46■■■□□ 2.95
TMEM55B-202ENST00000398020 ATG3Q9NT62 314 aa33.45■■■□□ 2.95
TMEM55B-202ENST00000398020 RREB1Q92766 1687 aa33.45■■■□□ 2.95
TMEM55B-202ENST00000398020 HTATSF1O43719 755 aaKnown RBP33.45■■■□□ 2.94
TMEM55B-202ENST00000398020 KCNQ4P56696 695 aa33.45■■■□□ 2.94
TMEM55B-202ENST00000398020 THUMPD2Q9BTF0 503 aaKnown RBP33.45■■■□□ 2.94
TMEM55B-202ENST00000398020 LY75O60449 1722 aa33.43■■■□□ 2.94
TMEM55B-202ENST00000398020 SMARCC1Q92922 1105 aaPredicted RBP33.42■■■□□ 2.94
TMEM55B-202ENST00000398020 NUP188Q5SRE5 1749 aa33.41■■■□□ 2.94
TMEM55B-202ENST00000398020 SIPA1L3O60292 1781 aaPredicted RBP33.41■■■□□ 2.94
TMEM55B-202ENST00000398020 SLC39A6Q13433 755 aa33.4■■■□□ 2.94
TMEM55B-202ENST00000398020 LRRC4BQ9NT99 713 aa33.4■■■□□ 2.94
TMEM55B-202ENST00000398020 CCNL1Q9UK58 526 aaPredicted RBP33.39■■■□□ 2.94
TMEM55B-202ENST00000398020 TRIM35Q9UPQ4 493 aa33.38■■■□□ 2.93
TMEM55B-202ENST00000398020 LMOD3Q0VAK6 560 aa33.36■■■□□ 2.93
TMEM55B-202ENST00000398020 PAPPAQ13219 1627 aa33.36■■■□□ 2.93
TMEM55B-202ENST00000398020 PTCD1O75127 700 aaKnown RBP33.36■■■□□ 2.93
TMEM55B-202ENST00000398020 RBM42Q9BTD8 480 aaKnown RBP33.36■■■□□ 2.93
TMEM55B-202ENST00000398020 SLC27A3Q5K4L6 730 aa33.35■■■□□ 2.93
TMEM55B-202ENST00000398020 LOC102724428A0A0B4J2F2 783 aa33.34■■■□□ 2.93
TMEM55B-202ENST00000398020 SIK1P57059 783 aa33.34■■■□□ 2.93
TMEM55B-202ENST00000398020 BTBD11A6QL63 1104 aa33.33■■■□□ 2.93
TMEM55B-202ENST00000398020 MIS18AQ9NYP9 233 aa33.32■■■□□ 2.92
TMEM55B-202ENST00000398020 SLC4A9Q96Q91 983 aa33.31■■■□□ 2.92
TMEM55B-202ENST00000398020 TAF7Q15545 349 aaPredicted RBP33.3■■■□□ 2.92
TMEM55B-202ENST00000398020 ANO8Q9HCE9 1232 aaPredicted RBP33.3■■■□□ 2.92
TMEM55B-202ENST00000398020 ATP6V1AP38606 617 aa33.29■■■□□ 2.92
TMEM55B-202ENST00000398020 ZNF790Q6PG37 636 aa33.29■■■□□ 2.92
TMEM55B-202ENST00000398020 TTC5Q8N0Z6 440 aa33.29■■■□□ 2.92
TMEM55B-202ENST00000398020 SALL2Q9Y467 1007 aaPredicted RBP33.29■■■□□ 2.92
TMEM55B-202ENST00000398020 KCNQ3O43525 872 aa33.29■■■□□ 2.92
TMEM55B-202ENST00000398020 KCPQ6ZWJ8 1503 aa33.28■■■□□ 2.92
TMEM55B-202ENST00000398020 ITPK1Q13572 414 aa33.27■■■□□ 2.92
TMEM55B-202ENST00000398020 UBR2Q8IWV8 1755 aa33.27■■■□□ 2.92
TMEM55B-202ENST00000398020 C5P01031 1676 aa33.26■■■□□ 2.92
TMEM55B-202ENST00000398020 NBPF14Q5TI25 921 aa33.26■■■□□ 2.91
TMEM55B-202ENST00000398020 TAF1LQ8IZX4 1826 aa33.25■■■□□ 2.91
TMEM55B-202ENST00000398020 ZNF496Q96IT1 587 aaPredicted RBP33.24■■■□□ 2.91
TMEM55B-202ENST00000398020 PSDA5PKW4 1024 aaPredicted RBP33.23■■■□□ 2.91
TMEM55B-202ENST00000398020 ZNF827Q17R98 1081 aa33.23■■■□□ 2.91
TMEM55B-202ENST00000398020 R3HDM1Q15032 1099 aaKnown RBP33.22■■■□□ 2.91
TMEM55B-202ENST00000398020 LINC00116Q8NCU8 138 aa33.22■■■□□ 2.91
TMEM55B-202ENST00000398020 LAS1LQ9Y4W2 734 aaKnown RBP33.22■■■□□ 2.91
TMEM55B-202ENST00000398020 STK32BQ9NY57 414 aa33.21■■■□□ 2.91
TMEM55B-202ENST00000398020 ZNF831Q5JPB2 1677 aa33.2■■■□□ 2.91
TMEM55B-202ENST00000398020 KDM3BQ7LBC6 1761 aa33.2■■■□□ 2.91
TMEM55B-202ENST00000398020 TJP1Q07157 1748 aa33.19■■■□□ 2.9
TMEM55B-202ENST00000398020 SLC15A2Q16348 729 aa33.19■■■□□ 2.9
TMEM55B-202ENST00000398020 WWC1Q8IX03 1113 aa33.19■■■□□ 2.9
TMEM55B-202ENST00000398020 TSPYL4Q9UJ04 414 aa33.19■■■□□ 2.9
TMEM55B-202ENST00000398020 C4BP0C0L5 1744 aa33.18■■■□□ 2.9
TMEM55B-202ENST00000398020 AKT1S1Q96B36 256 aa33.18■■■□□ 2.9
TMEM55B-202ENST00000398020 FMNL2Q96PY5 1086 aa33.18■■■□□ 2.9
TMEM55B-202ENST00000398020 CCDC27Q2M243 656 aa33.17■■■□□ 2.9
TMEM55B-202ENST00000398020 DNAJC10Q8IXB1 793 aa33.17■■■□□ 2.9
TMEM55B-202ENST00000398020 HEG1Q9ULI3 1381 aa33.16■■■□□ 2.9
TMEM55B-202ENST00000398020 COL5A3P25940 1745 aaPredicted RBP33.16■■■□□ 2.9
TMEM55B-202ENST00000398020 VSIG10Q8N0Z9 540 aa33.13■■■□□ 2.89
TMEM55B-202ENST00000398020 TFCP2L1Q9NZI6 479 aa33.13■■■□□ 2.89
TMEM55B-202ENST00000398020 CICQ96RK0 1608 aaPredicted RBP33.13■■■□□ 2.89
TMEM55B-202ENST00000398020 CHL1O00533 1208 aa33.13■■■□□ 2.89
TMEM55B-202ENST00000398020 PRAMEF22A3QJZ6 481 aa33.12■■■□□ 2.89
TMEM55B-202ENST00000398020 CALD1Q05682 793 aaKnown RBP33.12■■■□□ 2.89
TMEM55B-202ENST00000398020 AK7Q96M32 723 aa33.12■■■□□ 2.89
TMEM55B-202ENST00000398020 TUBGCP6Q96RT7 1819 aa33.11■■■□□ 2.89
TMEM55B-202ENST00000398020 NCBP3Q53F19 620 aaKnown RBP33.11■■■□□ 2.89
TMEM55B-202ENST00000398020 CFAP44Q96MT7 982 aa33.11■■■□□ 2.89
TMEM55B-202ENST00000398020 EIF4A1P60842 406 aaKnown RBP33.1■■■□□ 2.89
TMEM55B-202ENST00000398020 SMIM5Q71RC9 77 aa33.1■■■□□ 2.89
TMEM55B-202ENST00000398020 BABAM1Q9NWV8 329 aa33.1■■■□□ 2.89
TMEM55B-202ENST00000398020 PDGFDQ9GZP0 370 aaPredicted RBP33.1■■■□□ 2.89
TMEM55B-202ENST00000398020 CRKLP46109 303 aaKnown RBP33.09■■■□□ 2.89
TMEM55B-202ENST00000398020 AMIGO3Q86WK7 504 aa33.09■■■□□ 2.89
TMEM55B-202ENST00000398020 GNPATO15228 680 aa33.08■■■□□ 2.89
TMEM55B-202ENST00000398020 CYP19A1P11511 503 aaPredicted RBP33.08■■■□□ 2.89
TMEM55B-202ENST00000398020 MBIPQ9NS73 344 aa33.08■■■□□ 2.89
TMEM55B-202ENST00000398020 IFT57Q9NWB7 429 aa33.08■■■□□ 2.89
TMEM55B-202ENST00000398020 MYH14Q7Z406 1995 aaKnown RBP33.08■■■□□ 2.89
TMEM55B-202ENST00000398020 ZNF853P0CG23 659 aa33.07■■■□□ 2.89
TMEM55B-202ENST00000398020 HMGB2P26583 209 aaKnown RBP33.07■■■□□ 2.89
TMEM55B-202ENST00000398020 SNRPA1P09661 255 aaKnown RBP33.07■■■□□ 2.88
TMEM55B-202ENST00000398020 GNAI1P63096 354 aa33.07■■■□□ 2.88
TMEM55B-202ENST00000398020 CNTNAP4Q9C0A0 1308 aa33.06■■■□□ 2.88
TMEM55B-202ENST00000398020 PHF14O94880 888 aa33.05■■■□□ 2.88
TMEM55B-202ENST00000398020 NGEFQ8N5V2 710 aa33.05■■■□□ 2.88
TMEM55B-202ENST00000398020 USP16Q9Y5T5 823 aa33.05■■■□□ 2.88
TMEM55B-202ENST00000398020 UBR3Q6ZT12 1888 aa33.05■■■□□ 2.88
TMEM55B-202ENST00000398020 PNPLA7Q6ZV29 1317 aa33.05■■■□□ 2.88
TMEM55B-202ENST00000398020 KRT24Q2M2I5 525 aa33.04■■■□□ 2.88
TMEM55B-202ENST00000398020 RC3H1Q5TC82 1133 aaKnown RBP33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms