RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ADGRL3Q9HAR2 1447 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 PLEKHG1Q9ULL1 1385 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 OFD1O75665 1012 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 PXDNLA1KZ92 1463 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 ANKRD26Q9UPS8 1709 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 CCDC66A2RUB6 948 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 TM6SF1Q9BZW5 370 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 PLEKHG5O94827 1062 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 BRD1O95696 1058 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 STK26Q9P289 416 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 EMILIN1Q9Y6C2 1016 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 HSP90B1P14625 803 aaKnown RBP6.57□□□□□ -1.36
PTPRD-205ENST00000397611 CHMP4CQ96CF2 233 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 HMGN5P82970 282 aaKnown RBP6.57□□□□□ -1.36
PTPRD-205ENST00000397611 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
PTPRD-205ENST00000397611 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 CCAR2Q8N163 923 aaKnown RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 TNRQ92752 1358 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 TRIM6-TRIM34B2RNG4 842 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 TPM3P06753 285 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 PDE1AP54750 535 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 SETQ01105 290 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 TEX35Q5T0J7 233 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 USP6P35125 1406 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 GNAI2P04899 355 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 NOL7Q9UMY1 257 aaKnown RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 C8orf58Q8NAV2 365 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 SSH3Q8TE77 659 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 PRPF40AO75400 957 aaKnown RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 WDR33Q9C0J8 1336 aaKnown RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 XPCQ01831 940 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-205ENST00000397611 DIAPH3Q9NSV4 1193 aa6.56□□□□□ -1.36
PTPRD-205ENST00000397611 LETM1O95202 739 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 TPM4P67936 248 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 ATP8B2P98198 1209 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 TSPYL6Q8N831 410 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 RRAGDQ9NQL2 400 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 ADAMTS13Q76LX8 1427 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 CHMP3Q9Y3E7 222 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 LMTK3Q96Q04 1460 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 RAD50Q92878 1312 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 CRB1P82279 1406 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 EIF4A2Q14240 407 aaKnown RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 NME9Q86XW9 330 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 AEBP1Q8IUX7 1158 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 MAP3K5Q99683 1374 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 DIP2AQ14689 1571 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 ERICH4A6NGS2 130 aa6.55□□□□□ -1.36
PTPRD-205ENST00000397611 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
PTPRD-205ENST00000397611 SDSP20132 328 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 TSPY26PQ9H489 355 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 ZKSCAN5Q9Y2L8 839 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 PREX1Q8TCU6 1659 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 PDCP20941 246 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 TTC41PQ6P2S7 1318 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 ARHGAP23Q9P227 1491 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 BBXQ8WY36 941 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-205ENST00000397611 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 ALDH1L1O75891 902 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 SULT6B1Q6IMI4 303 aa6.54□□□□□ -1.36
PTPRD-205ENST00000397611 NOC3LQ8WTT2 800 aaKnown RBP6.54□□□□□ -1.36
PTPRD-205ENST00000397611 ZSCAN31Q96LW9 406 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-205ENST00000397611 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
PTPRD-205ENST00000397611 SAFB2Q14151 953 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPRD-205ENST00000397611 USP42Q9H9J4 1324 aaKnown RBP6.53□□□□□ -1.36
PTPRD-205ENST00000397611 RICTORQ6R327 1708 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 MX1P20591 662 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-205ENST00000397611 METP08581 1390 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 RGS22Q8NE09 1264 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 PRR36Q9H6K5 1346 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 FBXO31Q5XUX0 539 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-205ENST00000397611 LRRCC1Q9C099 1032 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 CCDC171Q6TFL3 1326 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 OVOS2A0A0G2JMS6 1433 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 WAPLQ7Z5K2 1190 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 PANK2Q9BZ23 570 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 KCNB2Q92953 911 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 SNRKQ9NRH2 765 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 GOLGA6L19H0YKK7 550 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 NPHP1O15259 732 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 FLIIQ13045 1269 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 SASS6Q6UVJ0 657 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 ESYT1Q9BSJ8 1104 aa6.53□□□□□ -1.36
PTPRD-205ENST00000397611 TPD52L1Q16890 204 aaPredicted RBP6.52□□□□□ -1.36
PTPRD-205ENST00000397611 EID1Q9Y6B2 187 aa6.52□□□□□ -1.36
PTPRD-205ENST00000397611 MAP3K19Q56UN5 1328 aa6.52□□□□□ -1.36
PTPRD-205ENST00000397611 NRKQ7Z2Y5 1582 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 HIP1O00291 1037 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
PTPRD-205ENST00000397611 PDCL2Q8N4E4 241 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 GLRX3O76003 335 aaKnown RBP6.52□□□□□ -1.37
PTPRD-205ENST00000397611 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms