RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.25
IFT140-202ENST00000397417 MX1P20591 662 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 CDK11BP21127 795 aaKnown RBP13.46□□□□□ -0.25
IFT140-202ENST00000397417 L1TD1Q5T7N2 865 aaKnown RBP13.46□□□□□ -0.25
IFT140-202ENST00000397417 BICD2Q8TD16 824 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 OTUD7AQ8TE49 926 aaPredicted RBP13.46□□□□□ -0.25
IFT140-202ENST00000397417 TBX22Q9Y458 520 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 ATP10AO60312 1499 aa13.46□□□□□ -0.26
IFT140-202ENST00000397417 ABCC1P33527 1531 aa13.46□□□□□ -0.26
IFT140-202ENST00000397417 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.26
IFT140-202ENST00000397417 CHAF1AQ13111 956 aaPredicted RBP13.46□□□□□ -0.26
IFT140-202ENST00000397417 RAB11FIP4Q86YS3 637 aa13.46□□□□□ -0.26
IFT140-202ENST00000397417 TTC39AQ5SRH9 613 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 CAVIN1Q6NZI2 390 aaKnown RBP13.45□□□□□ -0.26
IFT140-202ENST00000397417 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
IFT140-202ENST00000397417 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
IFT140-202ENST00000397417 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
IFT140-202ENST00000397417 IL13P35225 146 aa13.44□□□□□ -0.26
IFT140-202ENST00000397417 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
IFT140-202ENST00000397417 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
IFT140-202ENST00000397417 PTPRTO14522 1441 aa13.44□□□□□ -0.26
IFT140-202ENST00000397417 INSRP06213 1382 aa13.44□□□□□ -0.26
IFT140-202ENST00000397417 C8orf34Q49A92 452 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 PDE4CQ08493 712 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 METTL24Q5JXM2 366 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
IFT140-202ENST00000397417 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 AKAP17AQ02040 695 aaKnown RBP13.43□□□□□ -0.26
IFT140-202ENST00000397417 PRPF40BQ6NWY9 871 aaKnown RBP13.43□□□□□ -0.26
IFT140-202ENST00000397417 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 MSH6P52701 1360 aa13.43□□□□□ -0.26
IFT140-202ENST00000397417 STARD3NLO95772 234 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
IFT140-202ENST00000397417 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
IFT140-202ENST00000397417 MAST1Q9Y2H9 1570 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 MARCH6O60337 910 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
IFT140-202ENST00000397417 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 TBC1D9Q6ZT07 1266 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 NDUFB9Q9Y6M9 179 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 CCDC158Q5M9N0 1113 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 ZCRB1Q8TBF4 217 aaKnown RBP13.42□□□□□ -0.26
IFT140-202ENST00000397417 GDPD2Q9HCC8 539 aa13.42□□□□□ -0.26
IFT140-202ENST00000397417 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 PIK3C2GO75747 1445 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
IFT140-202ENST00000397417 PREX2Q70Z35 1606 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
IFT140-202ENST00000397417 TMEM2Q9UHN6 1383 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 TRAK2O60296 914 aa13.41□□□□□ -0.26
IFT140-202ENST00000397417 SETD1BQ9UPS6 1966 aaKnown RBP13.4□□□□□ -0.26
IFT140-202ENST00000397417 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 HAND2P61296 217 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 CASTP20810 708 aaKnown RBP13.4□□□□□ -0.26
IFT140-202ENST00000397417 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
IFT140-202ENST00000397417 NSD2O96028 1365 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 FLT4P35916 1363 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 SYAP1Q96A49 352 aaPredicted RBP13.39□□□□□ -0.27
IFT140-202ENST00000397417 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 AAMPQ13685 434 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 A1BGP04217 495 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 KCNQ4P56696 695 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
IFT140-202ENST00000397417 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
IFT140-202ENST00000397417 GOLIM4O00461 696 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 CPLX2Q6PUV4 134 aaKnown RBP13.38□□□□□ -0.27
IFT140-202ENST00000397417 LDHAL6AQ6ZMR3 332 aa13.38□□□□□ -0.27
IFT140-202ENST00000397417 CDC42BPBQ9Y5S2 1711 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
IFT140-202ENST00000397417 SDSP20132 328 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 CCDC83Q8IWF9 413 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 ROBO2Q9HCK4 1378 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
IFT140-202ENST00000397417 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
IFT140-202ENST00000397417 ERC1Q8IUD2 1116 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 IP6K1Q92551 441 aa13.36□□□□□ -0.27
IFT140-202ENST00000397417 PRAMEF22A3QJZ6 481 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms