RNA–Protein interactions for RNA: ENST00000397090.4

FGFR1-205, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-205ENST00000397090 WDR43Q15061 677 aaKnown RBP eCLIP28.55■■■□□ 2.16
FGFR1-205ENST00000397090 MTHFSDQ2M296 383 aaKnown RBP28.55■■■□□ 2.16
FGFR1-205ENST00000397090 GAS2L2Q8NHY3 880 aa28.55■■■□□ 2.16
FGFR1-205ENST00000397090 ACSBG1Q96GR2 724 aa28.55■■■□□ 2.16
FGFR1-205ENST00000397090 AKAP4Q5JQC9 854 aa28.54■■■□□ 2.16
FGFR1-205ENST00000397090 NEFMP07197 916 aa28.53■■■□□ 2.16
FGFR1-205ENST00000397090 AKT1S1Q96B36 256 aa28.53■■■□□ 2.16
FGFR1-205ENST00000397090 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
FGFR1-205ENST00000397090 LRRC4BQ9NT99 713 aa28.53■■■□□ 2.16
FGFR1-205ENST00000397090 PRIM1P49642 420 aaKnown RBP28.51■■■□□ 2.15
FGFR1-205ENST00000397090 PHACTR3Q96KR7 559 aa28.51■■■□□ 2.15
FGFR1-205ENST00000397090 QSER1Q2KHR3 1735 aa28.51■■■□□ 2.15
FGFR1-205ENST00000397090 MRS2Q9HD23 443 aa28.5■■■□□ 2.15
FGFR1-205ENST00000397090 DOT1LQ8TEK3 1739 aa28.49■■■□□ 2.15
FGFR1-205ENST00000397090 PNPLA7Q6ZV29 1317 aa28.49■■■□□ 2.15
FGFR1-205ENST00000397090 PLEKHF1Q96S99 279 aa28.49■■■□□ 2.15
FGFR1-205ENST00000397090 BTAF1O14981 1849 aa28.48■■■□□ 2.15
FGFR1-205ENST00000397090 CCDC184Q52MB2 194 aa28.48■■■□□ 2.15
FGFR1-205ENST00000397090 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
FGFR1-205ENST00000397090 SYTL4Q96C24 671 aaPredicted RBP28.48■■■□□ 2.15
FGFR1-205ENST00000397090 KDM6AO15550 1401 aaPredicted RBP28.47■■■□□ 2.15
FGFR1-205ENST00000397090 ERVV-2B6SEH9 535 aa28.47■■■□□ 2.15
FGFR1-205ENST00000397090 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
FGFR1-205ENST00000397090 ADAMTS8Q9UP79 889 aa28.46■■■□□ 2.15
FGFR1-205ENST00000397090 ADCY9O60503 1353 aa28.46■■■□□ 2.15
FGFR1-205ENST00000397090 SLC27A3Q5K4L6 730 aa28.45■■■□□ 2.14
FGFR1-205ENST00000397090 ZNF526Q8TF50 670 aaPredicted RBP28.45■■■□□ 2.14
FGFR1-205ENST00000397090 TOGARAM1Q9Y4F4 1720 aa28.44■■■□□ 2.14
FGFR1-205ENST00000397090 GNAT3A8MTJ3 354 aa28.44■■■□□ 2.14
FGFR1-205ENST00000397090 MPRIPQ6WCQ1 1025 aa28.44■■■□□ 2.14
FGFR1-205ENST00000397090 TFCP2L1Q9NZI6 479 aa28.44■■■□□ 2.14
FGFR1-205ENST00000397090 PNISRQ8TF01 805 aaKnown RBP28.42■■■□□ 2.14
FGFR1-205ENST00000397090 TMOD3Q9NYL9 352 aa28.42■■■□□ 2.14
FGFR1-205ENST00000397090 KAT6BQ8WYB5 2073 aa28.42■■■□□ 2.14
FGFR1-205ENST00000397090 RNMTO43148 476 aaKnown RBP28.4■■■□□ 2.14
FGFR1-205ENST00000397090 APLP1P51693 650 aa28.4■■■□□ 2.14
FGFR1-205ENST00000397090 RUNDC1Q96C34 613 aa28.4■■■□□ 2.14
FGFR1-205ENST00000397090 ADAMTS7Q9UKP4 1686 aa28.39■■■□□ 2.14
FGFR1-205ENST00000397090 HTATSF1O43719 755 aaKnown RBP28.39■■■□□ 2.14
FGFR1-205ENST00000397090 CABP4P57796 275 aa28.39■■■□□ 2.14
FGFR1-205ENST00000397090 NFE2L2Q16236 605 aa28.39■■■□□ 2.14
FGFR1-205ENST00000397090 PIGBQ92521 554 aa28.39■■■□□ 2.14
FGFR1-205ENST00000397090 LGR6Q9HBX8 967 aa28.37■■■□□ 2.13
FGFR1-205ENST00000397090 MRC1P22897 1456 aa28.37■■■□□ 2.13
FGFR1-205ENST00000397090 CCER2I3L3R5 266 aa28.36■■■□□ 2.13
FGFR1-205ENST00000397090 RTF1Q92541 710 aaKnown RBP28.36■■■□□ 2.13
FGFR1-205ENST00000397090 SMARCC1Q92922 1105 aaPredicted RBP28.36■■■□□ 2.13
FGFR1-205ENST00000397090 TUBGCP6Q96RT7 1819 aa28.36■■■□□ 2.13
FGFR1-205ENST00000397090 SCN11AQ9UI33 1791 aa28.35■■■□□ 2.13
FGFR1-205ENST00000397090 CCDC146Q8IYE0 955 aa28.35■■■□□ 2.13
FGFR1-205ENST00000397090 IL17REQ8NFR9 667 aa28.35■■■□□ 2.13
FGFR1-205ENST00000397090 SLC52A2Q9HAB3 445 aa28.35■■■□□ 2.13
FGFR1-205ENST00000397090 CEMIPQ8WUJ3 1361 aa28.34■■■□□ 2.13
FGFR1-205ENST00000397090 ITGB4P16144 1822 aa28.34■■■□□ 2.13
FGFR1-205ENST00000397090 DNAJC5GQ8N7S2 189 aa28.33■■■□□ 2.13
FGFR1-205ENST00000397090 NFATC2IPQ8NCF5 419 aa28.33■■■□□ 2.13
FGFR1-205ENST00000397090 KIF3CO14782 793 aa28.32■■■□□ 2.12
FGFR1-205ENST00000397090 TMPOP42166 694 aaKnown RBP28.32■■■□□ 2.12
FGFR1-205ENST00000397090 TEFQ10587 303 aa28.31■■■□□ 2.12
FGFR1-205ENST00000397090 CD2APQ9Y5K6 639 aa28.31■■■□□ 2.12
FGFR1-205ENST00000397090 PALLDQ8WX93 1383 aa28.31■■■□□ 2.12
FGFR1-205ENST00000397090 MSH5O43196 834 aa28.29■■■□□ 2.12
FGFR1-205ENST00000397090 KCNQ4P56696 695 aa28.29■■■□□ 2.12
FGFR1-205ENST00000397090 RIPK4P57078 832 aa28.29■■■□□ 2.12
FGFR1-205ENST00000397090 LMOD3Q0VAK6 560 aa28.29■■■□□ 2.12
FGFR1-205ENST00000397090 ATG3Q9NT62 314 aa28.29■■■□□ 2.12
FGFR1-205ENST00000397090 ASAP1Q9ULH1 1129 aa28.28■■■□□ 2.12
FGFR1-205ENST00000397090 CAPN15O75808 1086 aa28.27■■■□□ 2.12
FGFR1-205ENST00000397090 MCM10Q7L590 875 aa28.27■■■□□ 2.12
FGFR1-205ENST00000397090 HMGB2P26583 209 aaKnown RBP28.26■■■□□ 2.11
FGFR1-205ENST00000397090 COL13A1Q5TAT6 717 aaPredicted RBP28.25■■■□□ 2.11
FGFR1-205ENST00000397090 COL23A1Q86Y22 540 aaPredicted RBP28.25■■■□□ 2.11
FGFR1-205ENST00000397090 LY75O60449 1722 aa28.24■■■□□ 2.11
FGFR1-205ENST00000397090 DCTN1Q14203 1278 aa28.24■■■□□ 2.11
FGFR1-205ENST00000397090 MIER1Q8N108 512 aa28.24■■■□□ 2.11
FGFR1-205ENST00000397090 CCNL1Q9UK58 526 aaPredicted RBP28.24■■■□□ 2.11
FGFR1-205ENST00000397090 APAF1O14727 1248 aa28.23■■■□□ 2.11
FGFR1-205ENST00000397090 MSL1Q68DK7 614 aa28.23■■■□□ 2.11
FGFR1-205ENST00000397090 FAM9BQ8IZU0 186 aa28.23■■■□□ 2.11
FGFR1-205ENST00000397090 RRP7AQ9Y3A4 280 aaKnown RBP28.23■■■□□ 2.11
FGFR1-205ENST00000397090 LOC102724428A0A0B4J2F2 783 aa28.21■■■□□ 2.11
FGFR1-205ENST00000397090 SIK1P57059 783 aa28.21■■■□□ 2.11
FGFR1-205ENST00000397090 NEUROD2Q15784 382 aa28.21■■■□□ 2.11
FGFR1-205ENST00000397090 VIRMAQ69YN4 1812 aaKnown RBP28.2■■■□□ 2.11
FGFR1-205ENST00000397090 DLG5Q8TDM6 1919 aa28.2■■■□□ 2.1
FGFR1-205ENST00000397090 TOMM70O94826 608 aa28.19■■■□□ 2.1
FGFR1-205ENST00000397090 PRELPP51888 382 aa28.19■■■□□ 2.1
FGFR1-205ENST00000397090 NCBP3Q53F19 620 aaKnown RBP28.19■■■□□ 2.1
FGFR1-205ENST00000397090 TAF7Q15545 349 aaPredicted RBP28.18■■■□□ 2.1
FGFR1-205ENST00000397090 TRIM35Q9UPQ4 493 aa28.18■■■□□ 2.1
FGFR1-205ENST00000397090 SIPA1L3O60292 1781 aaPredicted RBP28.18■■■□□ 2.1
FGFR1-205ENST00000397090 BTBD11A6QL63 1104 aa28.17■■■□□ 2.1
FGFR1-205ENST00000397090 TTC5Q8N0Z6 440 aa28.17■■■□□ 2.1
FGFR1-205ENST00000397090 SLC39A6Q13433 755 aa28.16■■■□□ 2.1
FGFR1-205ENST00000397090 ZNF790Q6PG37 636 aa28.16■■■□□ 2.1
FGFR1-205ENST00000397090 TNS4Q8IZW8 715 aa28.16■■■□□ 2.1
FGFR1-205ENST00000397090 RBM42Q9BTD8 480 aaKnown RBP28.16■■■□□ 2.1
FGFR1-205ENST00000397090 THUMPD2Q9BTF0 503 aaKnown RBP28.16■■■□□ 2.1
FGFR1-205ENST00000397090 ZNF831Q5JPB2 1677 aa28.14■■■□□ 2.1
FGFR1-205ENST00000397090 PTCD1O75127 700 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms