RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 MAP3K11Q16584 847 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 NUP133Q8WUM0 1156 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 CDK5RAP3Q96JB5 506 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 SSFA2P28290 1259 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 DDX11Q96FC9 970 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 ZSCAN30Q86W11 494 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 PLEKHH1Q9ULM0 1364 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 ARHGAP45Q92619 1136 aa15.4■□□□□ 0.06
GREB1-206ENST00000396123 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
GREB1-206ENST00000396123 RBM10P98175 930 aaKnown RBP15.39■□□□□ 0.05
GREB1-206ENST00000396123 TDO2P48775 406 aa15.39■□□□□ 0.05
GREB1-206ENST00000396123 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
GREB1-206ENST00000396123 TCOF1Q13428 1488 aaKnown RBP15.39■□□□□ 0.05
GREB1-206ENST00000396123 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 ERCC4Q92889 916 aaPredicted RBP15.38■□□□□ 0.05
GREB1-206ENST00000396123 MYD88Q99836 296 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 DUOX2Q9NRD8 1548 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 PLCH2O75038 1416 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
GREB1-206ENST00000396123 CCDC85AQ96PX6 553 aaPredicted RBP15.38■□□□□ 0.05
GREB1-206ENST00000396123 UBAC1Q9BSL1 405 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 NOL7Q9UMY1 257 aaKnown RBP15.38■□□□□ 0.05
GREB1-206ENST00000396123 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 STARD3NLO95772 234 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
GREB1-206ENST00000396123 CDR1P51861 262 aa15.37■□□□□ 0.05
GREB1-206ENST00000396123 PPFIBP1Q86W92 1011 aa15.37■□□□□ 0.05
GREB1-206ENST00000396123 SCAND2PQ9GZW5 306 aaPredicted RBP15.37■□□□□ 0.05
GREB1-206ENST00000396123 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
GREB1-206ENST00000396123 CCDC8Q9H0W5 538 aaPredicted RBP15.37■□□□□ 0.05
GREB1-206ENST00000396123 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
GREB1-206ENST00000396123 NUCB1Q02818 461 aa15.37■□□□□ 0.05
GREB1-206ENST00000396123 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 CT47A1Q5JQC4 288 aaPredicted RBP15.36■□□□□ 0.05
GREB1-206ENST00000396123 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
GREB1-206ENST00000396123 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 TTC22Q5TAA0 569 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 WASF1Q92558 559 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 AIDAQ96BJ3 306 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 TESK2Q96S53 571 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 STIM1Q13586 685 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 ZNHIT6Q9NWK9 470 aaKnown RBP15.36■□□□□ 0.05
GREB1-206ENST00000396123 FILIP1Q7Z7B0 1213 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 LRP2BPQ9P2M1 347 aa15.36■□□□□ 0.05
GREB1-206ENST00000396123 FOXO3O43524 673 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
GREB1-206ENST00000396123 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
GREB1-206ENST00000396123 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 UQCRHP07919 91 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 ECHDC1Q9NTX5 307 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 RAI14Q9P0K7 980 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 ACEP12821 1306 aa15.35■□□□□ 0.05
GREB1-206ENST00000396123 SMTNL1A8MU46 457 aa15.34■□□□□ 0.05
GREB1-206ENST00000396123 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
GREB1-206ENST00000396123 CAMK4Q16566 473 aa15.34■□□□□ 0.05
GREB1-206ENST00000396123 HMGB1P09429 215 aaKnown RBP15.34■□□□□ 0.05
GREB1-206ENST00000396123 FBLN1P23142 703 aa15.34■□□□□ 0.05
GREB1-206ENST00000396123 NUTM2BA6NNL0 878 aaPredicted RBP15.33■□□□□ 0.05
GREB1-206ENST00000396123 NUTM2EB1AL46 878 aaPredicted RBP15.33■□□□□ 0.05
GREB1-206ENST00000396123 KRT18P05783 430 aaKnown RBP15.33■□□□□ 0.05
GREB1-206ENST00000396123 NUTM2AQ8IVF1 878 aaPredicted RBP15.33■□□□□ 0.05
GREB1-206ENST00000396123 EVI5LQ96CN4 794 aa15.33■□□□□ 0.05
GREB1-206ENST00000396123 SYCP2Q9BX26 1530 aa15.33■□□□□ 0.04
GREB1-206ENST00000396123 SOGA3Q5TF21 947 aa15.33■□□□□ 0.04
GREB1-206ENST00000396123 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
GREB1-206ENST00000396123 PIK3R4Q99570 1358 aa15.33■□□□□ 0.04
GREB1-206ENST00000396123 SF3B2Q13435 895 aaKnown RBP15.32■□□□□ 0.04
GREB1-206ENST00000396123 PPP1R42Q7Z4L9 355 aa15.32■□□□□ 0.04
GREB1-206ENST00000396123 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
GREB1-206ENST00000396123 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 A0A087WZG4 1122 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 BAG4O95429 457 aaKnown RBP15.31■□□□□ 0.04
GREB1-206ENST00000396123 PI4KAP2A4QPH2 592 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 PI4KAP1Q8N8J0 262 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 CEBPAP49715 358 aaPredicted RBP15.31■□□□□ 0.04
GREB1-206ENST00000396123 ATP2B2Q01814 1243 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 PUS7Q96PZ0 661 aaKnown RBP15.31■□□□□ 0.04
GREB1-206ENST00000396123 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
GREB1-206ENST00000396123 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
GREB1-206ENST00000396123 MEIS3Q99687 375 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 CEP131Q9UPN4 1083 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 C8orf34Q49A92 452 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms