RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
THUMPD1-202ENST00000396083 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
THUMPD1-202ENST00000396083 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
THUMPD1-202ENST00000396083 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 TEFQ10587 303 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 SMIM5Q71RC9 77 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 RIPK4P57078 832 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
THUMPD1-202ENST00000396083 APAF1O14727 1248 aa13.34□□□□□ -0.27
THUMPD1-202ENST00000396083 PLSCR1O15162 318 aa13.34□□□□□ -0.27
THUMPD1-202ENST00000396083 BCL9O00512 1426 aa13.34□□□□□ -0.27
THUMPD1-202ENST00000396083 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
THUMPD1-202ENST00000396083 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
THUMPD1-202ENST00000396083 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
THUMPD1-202ENST00000396083 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.28
THUMPD1-202ENST00000396083 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
THUMPD1-202ENST00000396083 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
THUMPD1-202ENST00000396083 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.28
THUMPD1-202ENST00000396083 KCNQ3O43525 872 aa13.32□□□□□ -0.28
THUMPD1-202ENST00000396083 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
THUMPD1-202ENST00000396083 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
THUMPD1-202ENST00000396083 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
THUMPD1-202ENST00000396083 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
THUMPD1-202ENST00000396083 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
THUMPD1-202ENST00000396083 SCN11AQ9UI33 1791 aa13.31□□□□□ -0.28
THUMPD1-202ENST00000396083 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
THUMPD1-202ENST00000396083 SIK1P57059 783 aa13.31□□□□□ -0.28
THUMPD1-202ENST00000396083 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
THUMPD1-202ENST00000396083 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
THUMPD1-202ENST00000396083 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
THUMPD1-202ENST00000396083 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
THUMPD1-202ENST00000396083 MSH5O43196 834 aa13.29□□□□□ -0.28
THUMPD1-202ENST00000396083 PHF14O94880 888 aa13.29□□□□□ -0.28
THUMPD1-202ENST00000396083 ITPK1Q13572 414 aa13.29□□□□□ -0.28
THUMPD1-202ENST00000396083 NBPF14Q5TI25 921 aa13.28□□□□□ -0.28
THUMPD1-202ENST00000396083 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
THUMPD1-202ENST00000396083 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
THUMPD1-202ENST00000396083 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.28
THUMPD1-202ENST00000396083 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
THUMPD1-202ENST00000396083 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
THUMPD1-202ENST00000396083 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.29
THUMPD1-202ENST00000396083 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
THUMPD1-202ENST00000396083 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 STK32BQ9NY57 414 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 SLC15A2Q16348 729 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
THUMPD1-202ENST00000396083 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
THUMPD1-202ENST00000396083 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
THUMPD1-202ENST00000396083 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
THUMPD1-202ENST00000396083 GNPATO15228 680 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 LY75O60449 1722 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 RREB1Q92766 1687 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 AK7Q96M32 723 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 ARXQ96QS3 562 aa13.24□□□□□ -0.29
THUMPD1-202ENST00000396083 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
THUMPD1-202ENST00000396083 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
THUMPD1-202ENST00000396083 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
THUMPD1-202ENST00000396083 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
THUMPD1-202ENST00000396083 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
THUMPD1-202ENST00000396083 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
THUMPD1-202ENST00000396083 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
THUMPD1-202ENST00000396083 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
THUMPD1-202ENST00000396083 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
THUMPD1-202ENST00000396083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.21□□□□□ -0.3
THUMPD1-202ENST00000396083 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.3
THUMPD1-202ENST00000396083 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.3
THUMPD1-202ENST00000396083 AKT1S1Q96B36 256 aa13.21□□□□□ -0.3
THUMPD1-202ENST00000396083 MRC1P22897 1456 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 C5P01031 1676 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 ADAMTS7Q9UKP4 1686 aa13.2□□□□□ -0.3
THUMPD1-202ENST00000396083 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 A1BGP04217 495 aa13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
THUMPD1-202ENST00000396083 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
THUMPD1-202ENST00000396083 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
THUMPD1-202ENST00000396083 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
THUMPD1-202ENST00000396083 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
THUMPD1-202ENST00000396083 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
THUMPD1-202ENST00000396083 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
THUMPD1-202ENST00000396083 ANXA1P04083 346 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms